| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1172 |
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| Symbol | |
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| ID | 5669585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1396382 |
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| End bp | 1397458 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641240104 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001505532 |
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| Protein GI | 158313024 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.811616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.138153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGAGGC CCAAGAGGCT GTGGCAGCGG TTCGTGCCAC TGGTTGCTGC CGGTGCGTTG
GCGCTGGCGG TGACCGCCTG CTCGGGCGAC GACGGGGGAA CGGAGTCCGT GTCGGCGTCC
GGGGAGGTGA CCGGGACCCT GCGGCTGGGG TACTTCCCGA ACCTCACGCA CGCCCCGGCG
CTCGTCGGCG TGGGGCAGGG CATCTTCGCC AAGGAGCTGG GTTCCGGCGT GAAGCTGGAG
CCGTCGACCT TCAACTCGGG CACCACGGAG GCGGAGGCGA TCCTCTCCGG CGCGCTCGAT
GCCGGCTTCA TCGGCCCGAA CCCCGCGGTG AACACGTTCA TCAAGTCCAA GGGTGAGGCC
ATCCGGATCG TTTCCGGCGT CACCTCCGGC GGGGCGGCCC TGGTCGTGAA GCCCGAGATC
ACCTCGGTCG AGCAGCTGCG TGGCAAGACG CTGGCGACCC CGAGCCTGGG CAACACCCAG
GACGTCGCGC TGCGGTTCTA CCTGAAGAAG AACGGCCTGG CGACCGACAC CAAGGGCGGC
GGTGACGTCT CGATCCGCCC GCAGGAGAAC TCGGTAACGG TCGACGCCTT CAAGTCCGGC
GCCATCGACG GAGCCTGGGT GCCTGAGCCG GTCGCCTCCC GACTGGTCGC AGAGGGCGGC
AAGGTGCTCG TCAACGAGGC CGACGAGTGG CCTGACACCG ACGGGAAGTT CGTGACCACC
CTCCTGGTCG TCCGCACGGA GTACCTGGAG AAGAACCCCG AGATCGTCCG CCGGCTCATC
GCCGCCAACA TCACGGCGAT CGACCAGCTC AACGCCGACC CGGCCGCCGG GCAGACCGCC
GCGAACGAGG CGCTGGACAA GCTCACCGGC AAGCCGCTCG CCGACGGCGT CGTCGCCTCG
GCCTGGAAGA CGCTGACCTT CACCCCGGAC CCGATCGCCA AGTCCCTGTT CATCTCGGCG
GCCCACCAGG AGGAGCTCGG GCTCATCGAG GACCCCAAGC TCGACGGCAT CTTCGACCTG
AAGATCCTCA ACGAGCTGCT CGCCGACGCC GGTGACCCCG CGGTCTCGGA CAAGTAG
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| Protein sequence | MMRPKRLWQR FVPLVAAGAL ALAVTACSGD DGGTESVSAS GEVTGTLRLG YFPNLTHAPA
LVGVGQGIFA KELGSGVKLE PSTFNSGTTE AEAILSGALD AGFIGPNPAV NTFIKSKGEA
IRIVSGVTSG GAALVVKPEI TSVEQLRGKT LATPSLGNTQ DVALRFYLKK NGLATDTKGG
GDVSIRPQEN SVTVDAFKSG AIDGAWVPEP VASRLVAEGG KVLVNEADEW PDTDGKFVTT
LLVVRTEYLE KNPEIVRRLI AANITAIDQL NADPAAGQTA ANEALDKLTG KPLADGVVAS
AWKTLTFTPD PIAKSLFISA AHQEELGLIE DPKLDGIFDL KILNELLADA GDPAVSDK
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