| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1170 |
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| Symbol | ispG |
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| ID | 5669583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1394101 |
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| End bp | 1395255 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641240102 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001505530 |
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| Protein GI | 158313022 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.151599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTAA CTCTGGGCAT GCCCGCCGCT CCGCCTCGTC CGGTCGGAAC GCGGCGGCTC
AGCCGGCAGA TCCACGTGGG CAACGTCCCG GTCGGAGGTG ACGCCCCGGT CTCCATCCAG
TCGATGTGCA CCACGCTGAC CTCGGACGTC AACGCGACCC TTCAGCAGAT CGCCCAGCTC
ACCGCCGCCG GATGTCAGAT CGTGCGGGTG GCGGTGCCCA GCCAGGACGA CGCCGACGCG
CTGCCGACGA TCGCCCGCAA GTCGCCGATC CCGATCATCG CCGACATCCA CTTCCAGCCG
AAGTACGTCT TCGCCGCGAT CGACGCCGGG TGCGCCGCCG TCCGGGTGAA CCCGGGCAAC
ATCAAGCAGT TCGACGACAA GGTCGGCGAG ATCGCCCGCG CCGCCAAGGC GGCCGGCACC
CCGATTCGGA TCGGGGTCAA CGCCGGGTCA CTCGACAAGC GCCTGCTGGA GAAGTACGGG
AAGGCCACTC CGGAGGCGCT GGTCGAGTCG GCGCTGTGGG AGGCCTCGCT GTTCGAGGAG
CACGACTTCC GGGACATCAA GATCTCGGTG AAGCACAACG ACCCCGTGAT CATGATTCAG
GCCTACCGGC TGCTGGCCCA GGCCTGTGAC TACCCGCTGC ACCTCGGCGT CACCGAGGCG
GGCCCGGCGT TCCAGGGCAC GGTGAAGTCC GCGGTGGCCT TCGGCGCGCT GCTGTCCGAG
GGCATCGGCG ACACGATCCG GGTCTCGCTG TCGGCGCCGC CCATCGAGGA GATCAAGGTC
GCCTCGGCGA TCCTGGAGTC GCTCGGGCTG CGCGAGCGCA AGCTGGAGAT CGTCTCCTGC
CCGTCCTGCG GCCGCGCCCA GGTGGACGTC TACACCCTGG CCAACGAGGT CAGCGCCGGC
CTGGAGGGCA TGGAGGTGCC GCTGCGGGTG GCCGTCATGG GCTGCGTCGT CAACGGCCCC
GGTGAGGCCC GCGAAGCCGA CCTCGGCGTT GCCTCCGGCA ACGGCAAGGG TCAGATCTTC
GTGCGCGGAA AGGTCATCAA GACGGTGCCC GAGGCGCAGA TCGTGGAGAC TCTCATCGAG
GAGGCCATGC GGCTGGCCGA GCAGATGGAG GCCGACGGCG CGGCCTCCGG CTCGCCGTCG
GTGTCCGTGG CCTAG
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| Protein sequence | MTVTLGMPAA PPRPVGTRRL SRQIHVGNVP VGGDAPVSIQ SMCTTLTSDV NATLQQIAQL
TAAGCQIVRV AVPSQDDADA LPTIARKSPI PIIADIHFQP KYVFAAIDAG CAAVRVNPGN
IKQFDDKVGE IARAAKAAGT PIRIGVNAGS LDKRLLEKYG KATPEALVES ALWEASLFEE
HDFRDIKISV KHNDPVIMIQ AYRLLAQACD YPLHLGVTEA GPAFQGTVKS AVAFGALLSE
GIGDTIRVSL SAPPIEEIKV ASAILESLGL RERKLEIVSC PSCGRAQVDV YTLANEVSAG
LEGMEVPLRV AVMGCVVNGP GEAREADLGV ASGNGKGQIF VRGKVIKTVP EAQIVETLIE
EAMRLAEQME ADGAASGSPS VSVA
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