| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1161 |
|---|
| Symbol | rpsB |
|---|
| ID | 5669574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1383864 |
|---|
| End bp | 1384766 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641240093 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_001505521 |
|---|
| Protein GI | 158313013 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.404957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCG TCACCATGAA GCAGCTCCTC GAGAGCGGCG TGCACTTCGG GCACCAGACC
AAGCGCTGGA ACCCGAAGAT GAAGCGCTAC ATCTTCACGG AGCGCAATGG CATCTACATC
ATCGACCTCC AGCAGACGCT GTCGTACATC GACCGCGCCT ACGACTTCGT CAAGGAGACG
GTCGCCCACG GCGGCACCGT CCTCTTCATC GGGACGAAGA AGCAGGCACA GGAGGCGATT
GAGGAGCAGG CCCAGCGGGT CGGCATGCCC TTCGTCAAGG AGCGTTGGCT CGGTGGGATG
CTGACCAACT TCTCCACGGT CTACAAGCGG CTCCAGCGGC TCAAGGAGCT TGAGGAGATC
GAGCTGACCG GCGGCACGGA GGTGCGCACC AAGAAGGAGC AGCTCGTCCT GACCCGGGAG
AAGGCGAAGC TCGAGCGCAC CCTCGGTGGT ATCCGCGACA TGGCCCGCGT GCCGAGCGCG
GTGTGGGTCG TGGACACGAA GAAGGAGCAC ATCGCCGTCG GTGAGGCCCG CAAGCTGGGC
ATCCCGGTCG TGGCGATCCT CGACACCAAC TGCGACCCCG ACGAGGTCGA CTACCCGATC
CCGGGCAACG ACGACGCGAT CCGCAGCGCG GCGCTGCTGA CCCGTGTCGT CGCTGACGCG
GTGGCCGAGG GTCTGATGTC GCGGGCCGGC GCGTCGAGCA ACGCCGAGGC CAAGCCGGAG
CAGTCCACCG GCGAGGAGCC GCTCGCCGAG TGGGAGCAGG CCCTGCTGCG TGGGGACGCC
GCGGCCGAGG CGCCCGCCGC CCCGGTGGCG GCCGAGGCCG CCGAGCCGAC CGAGGCGGTC
GCGGCTGTCG AGACGGCCAC CGAGGAGCAG CCCCAGCCGG ACGCGGTCGG CACCGCGGTC
TGA
|
|---|
| Protein sequence | MAVVTMKQLL ESGVHFGHQT KRWNPKMKRY IFTERNGIYI IDLQQTLSYI DRAYDFVKET
VAHGGTVLFI GTKKQAQEAI EEQAQRVGMP FVKERWLGGM LTNFSTVYKR LQRLKELEEI
ELTGGTEVRT KKEQLVLTRE KAKLERTLGG IRDMARVPSA VWVVDTKKEH IAVGEARKLG
IPVVAILDTN CDPDEVDYPI PGNDDAIRSA ALLTRVVADA VAEGLMSRAG ASSNAEAKPE
QSTGEEPLAE WEQALLRGDA AAEAPAAPVA AEAAEPTEAV AAVETATEEQ PQPDAVGTAV
|
|---|
| |