Gene Franean1_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1149 
Symbol 
ID5669562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1372022 
End bp1372255 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content72% 
IMG OID641240081 
Producthypothetical protein 
Protein accessionYP_001505509 
Protein GI158313001 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0258994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGAAG CGGCCCTCGA GCACCTCGTC CGAGGCATCG TCGACTATCC CGACGATGTC 
CGGGTGGATC TGTCGAGCAA CCGGCGCGGC CGGACGCTGG AGGTCCGGGT GCACCCCGAC
GACCTCGGCA AGGTCATCGG CCGGCGCGGC CGGACGGCTC GGGCGTTGCG CACCGTGATG
GGCGGTGTGG GCGGTCGCGG TCTGCGGATC GACGTCGTCG ACGTGGACCG GTAG
 
Protein sequence
MLEAALEHLV RGIVDYPDDV RVDLSSNRRG RTLEVRVHPD DLGKVIGRRG RTARALRTVM 
GGVGGRGLRI DVVDVDR