| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1148 |
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| Symbol | rpsP |
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| ID | 5669561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1371536 |
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| End bp | 1372021 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641240080 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_001505508 |
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| Protein GI | 158313000 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0271255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTGTTCCG GTGGTCATCG ATATGTCTGG AGCCGTACGA CCACCGTGGC AACAAAGATC
AAACTTCAGC GCCTCGGCAA GATGCGCGAG CCGCACTACC GCATCGTCGT CGCCGACGCC
CGCACCAAGC GGGACGGCCG GGTCATCGAG GCCATCGGGC AGTACCACCC GAAGTCCGAC
CCGAGCATCA TCAAGGTCGA CCCGGACCGC GTCGGTCACT GGCTCTCCGT CGGCGCCCAG
CCGACCGAGC CCGTGCTCGC GATCCTCAAG GTGACCGGCG ACTGGCAGAA GTTCAAGGGC
CTGCCCGCTC CCCCGCCGAT GAAGGTCGCG GCTCCCAAGC CCGACAAGCG GGAGATCTTC
GCGGAGGCGG CCCGCGCCGC GGCCGCGGCG GACGACAAGC CCGCCACCAC TCCGAAGAAG
GCGAAGAAGT CGGCCGCGGC CGATGGTGCC GAGTCGGCGC CCGCCGAGTC CGCCGCGGGG
CAGTAA
|
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| Protein sequence | MCSGGHRYVW SRTTTVATKI KLQRLGKMRE PHYRIVVADA RTKRDGRVIE AIGQYHPKSD
PSIIKVDPDR VGHWLSVGAQ PTEPVLAILK VTGDWQKFKG LPAPPPMKVA APKPDKREIF
AEAARAAAAA DDKPATTPKK AKKSAAADGA ESAPAESAAG Q
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