| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1141 |
|---|
| Symbol | |
|---|
| ID | 5669554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1361159 |
|---|
| End bp | 1361935 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641240073 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505501 |
|---|
| Protein GI | 158312993 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.586693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.011116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCG ACGCTCTGCT CGGCCGCGTG CGCAAGCTGC TGGCGATGGC GGAGGCCGAG
GGCCTGCCTG ACGCGGCCCG GGAGAGCTAC AACGCCAAGG CGGCGGAGCT CATCGCCCAA
TACGGCATCG ACCGGGCACT GATCGAGGAC GGTTCTCCCA CCGGCCCGGC CGCCGGCGAC
GTCGTGATGG GCATCGACGC GCCGTACGCG CGGGACAAGA TCTCTCTGCT CGCCAGCGTC
GCCGACCCCC TGGGCTGCCG GCTCGTGCAC CGCACGGCGC CGTCTCCGGC GGGCAGCGGC
GGAGCAACCC TGCACTCCGC GCACCTGTTC GGCATGGCGG TCGACATCGA GCGGGTGCAG
ATGATCTACA CCTCGCTGCT CGTCCAGCAG GCGCACGGCC TCGCGGCGGC CCGTCCGCCG
GCCTGGGAGG ATCCGCGAGC TTTCCGCCGG TCCTGGATGG CGGGCTTCGC CGTCGCCGTC
CGGGACAGGC TCGCCCAGGC CGAGGAGGCG GCGCGCCGCA GGGCGGAGGA GAGCCGGGCG
GCCGACCCGG CCGCCGCCGG GCCGGCCGCC CGGCGTTCGG TCGCGGTCGT GCTGGCCGGT
CGGGAGGGCC TGGTCGAGGC ACATCTCGCC CGTGTCTATC CGCGTTTGCG CACGACCCGA
ACGAGGCAGC TCTCCGGATC CGGCGGTCGG GACGGCTATC AGGCCGGCCA GCGGGCAGAC
CTCGGGGAGG GCAGGCGGGT GCCGTCGCAG CGGCGGGCGC GGCGGCAGAT CAGTTGA
|
|---|
| Protein sequence | MNPDALLGRV RKLLAMAEAE GLPDAARESY NAKAAELIAQ YGIDRALIED GSPTGPAAGD
VVMGIDAPYA RDKISLLASV ADPLGCRLVH RTAPSPAGSG GATLHSAHLF GMAVDIERVQ
MIYTSLLVQQ AHGLAAARPP AWEDPRAFRR SWMAGFAVAV RDRLAQAEEA ARRRAEESRA
ADPAAAGPAA RRSVAVVLAG REGLVEAHLA RVYPRLRTTR TRQLSGSGGR DGYQAGQRAD
LGEGRRVPSQ RRARRQIS
|
|---|
| |