Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1133 |
Symbol | |
ID | 5669546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1354912 |
End bp | 1355469 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641240065 |
Product | putative methyltransferase |
Protein accession | YP_001505493 |
Protein GI | 158312985 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.377583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0222442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGGA TCGTCGGCGG GCACGCCGGG GGGCGGCGGC TGGTGGTGCC GCCGGGCGGC GCGACCAGGC CCACCTCCGA ACGGACGAGG GAGGGCTTGT TCAACACACT CGCGACGCTG GTGGATCTCG CTGGAGCAAG GGTCGCGGAC CTGTACGCGG GCTCCGGCGC GGTCGGGCTC GAGGCGTTGT CCCGCGGCGC GGCGCACGCC CTGCTCGTCG ACCGGGACGC GACGGCGGTG CGCACCCTGC GCCGCAACGC GGAGGCCCTC GGCCTGGCGG GCGCCGAGGT GGTGCGCTCG GCGGTGGAAC GGGTCCTGTC CGCCACCCCG GCCGAGGCCT ACGACGTGGT CTTCCTCGAT CCGCCCTACG CCCTGCCCGG CGCCGAGCTC GACGGCGTGC TCGGGCAGCT GGTCGGCGGC GGCTGGCTGG CCCCGGGCGC GGTCTGTGTG GTCGAGCGCG CGTACCGGAG CGGTCCCGTG ACCTGGCCGG ACGGCCTCAT AGCACTGCGT GAGCGCAGGT ACGGAGAGGG GGTCCTCTGG TACGGTAATC GATCATGA
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Protein sequence | MTRIVGGHAG GRRLVVPPGG ATRPTSERTR EGLFNTLATL VDLAGARVAD LYAGSGAVGL EALSRGAAHA LLVDRDATAV RTLRRNAEAL GLAGAEVVRS AVERVLSATP AEAYDVVFLD PPYALPGAEL DGVLGQLVGG GWLAPGAVCV VERAYRSGPV TWPDGLIALR ERRYGEGVLW YGNRS
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