| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1132 |
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| Symbol | |
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| ID | 5669545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1352559 |
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| End bp | 1354904 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240064 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001505492 |
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| Protein GI | 158312984 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0660561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTATC GAAGGGTGCT CGACCTTGAC ACCCCGCTGA AGGGCCCGCT GGGAACGCGC
ACCGCCGCGC TGCTCGCCGA CGGCCTGGAA CTCGATACCG TCGGGGATCT CCTCGACCAC
CTCCCGCGGC GCTACCACGA GCGCGGCGAG CTCACCGATC TCCACGAGCT CGCCGTCGGC
GAGATCGCCA CCGTGCAGGC CCGGGTGACG AAGGTCGTCC GGCACCAGGG CCGGCCCGGG
TCGGGTGGCG GGCCGCGCCG GCGCGGCGGT GGTGGCCGCA CGGAGATCAC GGTCACCGAC
GGCCGCGGTG AGCTCTCGCT GGTGTTCTTC AACCAGCAGT GGCGGGCGAA GGAGCTCGTC
CCCGGCACGA CCGCGCTGTT CGCCGGCAAG GTGGCCGAGT TCCGCGGCCG GCGCCAGCTC
ATCCATCCCG AGGTCCATCT CCTCGACGCG CCAGACCCCG AAGGCGACGC CGACGGGGCC
GACGGAGCCG ACGGAGCCAG CGGTGCCGAT GGAGTCGGCG TCGTCGAAGG AGCCGGCGGT
GCCGGGAGCG GCGCCGCGGC GGCGGGCGAG CCGGCCCCGG TGGCCGCCGG ATTCGCCGGT
TCCCTCGTCC CGATCTACCC GGCCACGGCG AAGATCACGA GCTGGACGCT GGCGCGCTGC
CTGCGGCTGG TGCTCGACTC GCTCGGCGAG CTGGACGATC CACTTCCGGC GGTGCTGCGG
TCCCGACATC GCCTCGCCAG CCTGCGCAGA GCCTACGAAC TGGCCCACCG CCCGACCTCG
CGGGCCGACA TCGCCGTCGC CCGCACCCGG CTGAAGTGGG ACGAGGCGCT CGTCGTGCAG
GTCGCCCTCG CCCAGCGGCG CCGGCGCGCG GAGCTGGCCG CCACGGTGTC CCGGCCGGGG
TGCGCCGGCG GCCTGCTCGA CGCGTTCGAC GCCGCGCTGC CGTTCGCGCT GACCGACGGC
CAGCGCGAGG TGGGGGAGAC CATCGCGGCC GAGATGGCCA GGGCGTTCCC GATGCACCGG
CTGCTGCAGG GCGAGGTCGG CTCGGGCAAG ACGGTGGTCG CCGTGCGGGC CATGCTCACC
GCCGTCGACT CGGGCGGGCA GGCCGTCATG CTGGCACCCA CCGAGACGCT GGCGGCCCAG
CATCACCGCA GCCTGCTCAA ACTGCTCGGC GACCAGGCCC GGGCCGGCGA GCTCGGGGTG
GACGGCCCCG CGACCAGGGT GGCGCTGCTG ACCGGCTCGA TGCCGGCCCG GGCCCGGCGC
GAGGTGCTCG CCGCCGTCGC CGACGGCAGC GTCGGCCTCG TGGTCGGCAC CCACGCGCTG
CTCGGCGCGG ACGTCGCCTT CGCGGACCTG GCCCTGGTCG TCGTCGACGA GCAGCACCGG
TTCGGCGTGG AACAGCGCGA CGAGCTGCGC TCGCGGGGCC GGCGCCCGCC GCACCTGCTC
GTCATGACCG CGACGCCCAT CCCGCGCACC GTGGCCATGA CGGTGTTCGG TGATCTCGAG
GTCTCCACAC TGAACCAGCT CCCGGCCGGG CGCTCGCCGA TCTCGACCTT CGTCGTCCCC
GCGGCGAAGA GTCACTTCAT GGACCGGATG TGGGGCCGGG TGCGAGACGA GGTCGCCGCC
GGGCACCAGG CGTACGTGGT GTGCCCCCGG GTCGGCGACG GCGAGGGCGG AGACGGCGGC
GAGGAGCCGT CCGGGCCGCC CGCGAGCGGG GCCGGCCCGC GGGAAGGGGA GCGCGTCGGC
GCGACGGTCA CCGAGGTGCT GCCCCGGCTC GCCACGGGCG AGCTCGCCGG CCTGCGCGTC
GAGGGCCTGC ACGGGCGGCT GCCCTCCCCG GTCCGGGACG AGATCATGAC CCGCTTCGCC
GCCGGCGAGG TGGACGTCCT GGTGGCCACC ACGGTGATCG AGGTCGGCGT GGACGTCCCG
AACGCCACCG TCATGATCAT CATGGATGCC GACTGGTTCG GGGTGTCCCA GCTGCACCAG
CTGCGCGGGC GGGTGGGGCG GGGCAGTGCG CCCGGGGTGT GCCTGCTGCA CACCTCCGTC
GACGGCGCCG TGCCGGCCGC CGAGCGCCTG CTGGCCGTCG CCGCGACGTC GGACGGCGCC
GAGCTGGCCC GGCTCGACCT CGTCCAGCGG CGGGAGGGCG ACGTCCTCGG TGCGGCCCAG
TCCGGCGGGC GCCGGTCGCT GCGCCTGCTC GAGCTGCTGC GGGACGAGGA CCTCATCCGC
GCCGCGCGTG AGGAGGCCGG GGCGCTCGTG GCGGCGGACC CCGAGCTCGA GGGCCAGCCG
GCCCTGCTGC GCCGGCTCAC GGCCGCGTTG GACGAGGCCA GCGCGGCCTT CCTGGAGAAG
GGCTGA
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| Protein sequence | MQYRRVLDLD TPLKGPLGTR TAALLADGLE LDTVGDLLDH LPRRYHERGE LTDLHELAVG
EIATVQARVT KVVRHQGRPG SGGGPRRRGG GGRTEITVTD GRGELSLVFF NQQWRAKELV
PGTTALFAGK VAEFRGRRQL IHPEVHLLDA PDPEGDADGA DGADGASGAD GVGVVEGAGG
AGSGAAAAGE PAPVAAGFAG SLVPIYPATA KITSWTLARC LRLVLDSLGE LDDPLPAVLR
SRHRLASLRR AYELAHRPTS RADIAVARTR LKWDEALVVQ VALAQRRRRA ELAATVSRPG
CAGGLLDAFD AALPFALTDG QREVGETIAA EMARAFPMHR LLQGEVGSGK TVVAVRAMLT
AVDSGGQAVM LAPTETLAAQ HHRSLLKLLG DQARAGELGV DGPATRVALL TGSMPARARR
EVLAAVADGS VGLVVGTHAL LGADVAFADL ALVVVDEQHR FGVEQRDELR SRGRRPPHLL
VMTATPIPRT VAMTVFGDLE VSTLNQLPAG RSPISTFVVP AAKSHFMDRM WGRVRDEVAA
GHQAYVVCPR VGDGEGGDGG EEPSGPPASG AGPREGERVG ATVTEVLPRL ATGELAGLRV
EGLHGRLPSP VRDEIMTRFA AGEVDVLVAT TVIEVGVDVP NATVMIIMDA DWFGVSQLHQ
LRGRVGRGSA PGVCLLHTSV DGAVPAAERL LAVAATSDGA ELARLDLVQR REGDVLGAAQ
SGGRRSLRLL ELLRDEDLIR AAREEAGALV AADPELEGQP ALLRRLTAAL DEASAAFLEK
G
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