| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1119 |
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| Symbol | |
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| ID | 5669532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1337698 |
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| End bp | 1340304 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240051 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001505479 |
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| Protein GI | 158312971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.135201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.145859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTCTAC TGCTCGACGG CGTCGGGATC GTGGCGGGTC TCACCGCGGC GGCCGGCTGC
GTGTGGACAG GCCGCCGGCT CGGGCGGGCC CACGGCAGAT GGCTGATCTG GGTCGCCGCG
GCGCTGGTGG CGTGGACGGC CAGCCAGTCG GTGTGGGTCG CCGACGGGCG CGACGGCCAG
CGGCCCCGCC GGCCGTCCCT GGCGGACGTC GGCTACCTGG CGATGCCCGT CCTGGCACTC
GCGGCGCTCG CCGCGACCCC GACCGCGCGG GCGCGCCGGC CGGTGAACCA GCCGGATCTG
CCGCCCCTGC CGGCGGGTGT GCCGATCGCG GGCGGGCCGG GGACCTCAGG TGGTTCCGGT
GGCTTCGGTG GCTTCGGTGG TTCCTACCGG GTCCGCCGGT CGCGGGCGGA GCGCACCGGT
GACGGCGTCG CGGGCCTGGT GGACCGGCTG CTGCTTGCCT GCTCGGTGAT TCTCGTCGGC
TGGGGGCTCG GGGTGCGCCC CGCGCTCGCC GCCGCCGGCA CGGACGGGTG GAGCCGCGCC
GTGGCGGCCG TCTATCCCGC CGGGGCGGTG CTGCTCGTCG TCGCCGCGCT GCACGCCACG
GCGTTCCGGC GGCCTCCGGA CCGGGTCCGG ATCCTCGCGG CCGCCGTGGG CCTGTTCCTG
ATCGCCGCCT CGACCTCGTG GCTTCGCGGG CCGACCGACG CCGCCGCCTT CCCGGCGGTG
GTCGGGGTCG TGCCGATCGC CGGCTGCGCG TTCGTCCTGC TGGCCGTGCT GCGCGCGGCC
GGCGGCGCCC GGGTCGGGAC GGCGGGCTTC GTACTCCCGG CGGCCGCGCG CGCCGCGGGT
CCAGAGCACG CCGCGGGGCA TGCGCACGCC ATGGACTTCG GTCACGCCGC GCGGTTCGGC
CATGCCGTCG GGTACGGACA CACCGTGTTG ACACGCGCCG GCACCGGCGG CGTTCGCGGG
GCTGGCGGTG GACGGGCGGC TGGCGGTGGA CGGGGGGCCG GCGGCGCCGA CGTGGGCGAC
GCCGGCGACG GGTCCGAGCG CTGGGGCTTT CTCCTGGTGC CCACGCTGGT CGCCGGCTGC
GCGACGGCGA CGGTGCTGGC CGGCCTCGCC GGCGGCCACC GCCTCGACGG CATCGAGATC
GGGCTGGCCG CGGTGGTAGT CGCCGGGATG GTGGCCGACC GCCTGGTGGC GGCCCGCGCG
GGCCGGCGGC TCGCACAGCG GGTCCACGCC GCCGAACGGG AGATCCACCA CCGGGTCTTC
CACGACCCGC TCACCGAGCT GGCGAACCGC GCGCTGTTCC AGCACCGGCT GCGCGGCGCC
CTGACCGACC GCTGGCGCTC CGGCGACGAC CGGTCCGGTG GCGACATCGC CATCCTGTAC
TGCGATCTTG ACGACTTCAG CGCCCTCAAC GACAGCCTCG GCCCGGCGGC CGGTGACCAT
CTGCTGCGCA CCGTCGCGCA GCGGCTGCGG CACTGCGTGC GCACCACCGA CCTGGTCGCC
CGGGTCGGCG CGGACGAGTT CGCGGTACTG CTGGCCGGCG GCGACGAGTC GCCCGAGGCG
GTCGGGGAGC GGGTGCTGGC CGCGCTGCGC CACCCGATGG CGGTCGGCGG GCAGCCGCGC
TCGATCCGCG CCAGTGTCGG GCTCGCTGTC GCCCGCCGCA CCCACGAGAC CGGGGAGTCG
CTGCTTCGGC ACGCCGAGAC GGCCGTCCAC GTGGCCAAGT GCTCGGGCAA GAACCGGCTG
GTGACCTACC GGCCCGGGAT GGCCTCGCCG GAGGCTGGCG CGCACCTGGC TGACGCGCTG
GCCACGGCGC TGCGCCGTGG CGGGCGCTCG GCGGGCTTCG ACGTCCACTA CCAGCCGATC
GTGCGGCTGC GGGACGGGCA CCCGGTGGCG CTCGAGGCCC TCGCCCGCTG GACCGACCCG
GGGCGCGGGC CCGTCCCGCC CGGCACGTTC GTCGCCGCCG CCGAGAACGG GGGGATGGTC
GGCCTGCTCG ACGACCTGGT GCTCACCCGG GCGTGCACCG AGGTCGCGCT GGCCTACCCG
GCCGGCTCGC GGCTGCGGCT GCACGTGAAC GTCTCGGCGA GCCGGATCAC CGACACCAGG
CTGCGTGACA GCGTCGCCCG GGTGCTCGCC GCGAGCCGGC TCGACCCCCG CCGGCTCGTC
GTGGAGGTCA CCGAGACCAG CCGGATCGCG GATCTCTCCG CCGCGGCCGA CGTGCTCTCG
GGCGTGCGGG ACCTGGGGGT GGCGATCGCG CTGGACGACG TCGGCGCGGG CAACACGAGC
CTGGCCGTCC TGCACCGGCT GCCGGTGGAC GTCGTCAAGC TGGACCGCAC GCTCATCGAG
TTCCCGATGG ACGGCAGCCG GGTCTCGAAC CTGCGTCGCT CGATGATCGA CGTCGCCCAC
GCGCTCGGGG CGGTCGTGGT CGCCGAGGGC ATCGAGCGGG AGTCGCAGCT GGTGGAGCTG
GACCGTCTCG GCTGCGAGCT CGGCCAGGGT TTTCTCTTCG CGCGGCCCGG GCCGCTGTCG
GGTCTGCCGC CCATCGGCGG CGGTTCCGGT GACGGCGAGG ACGGCTATGG CTCCGGCGGG
GGGGAAGGCG GGTCCCAGAA GTGGTGA
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| Protein sequence | MPLLLDGVGI VAGLTAAAGC VWTGRRLGRA HGRWLIWVAA ALVAWTASQS VWVADGRDGQ
RPRRPSLADV GYLAMPVLAL AALAATPTAR ARRPVNQPDL PPLPAGVPIA GGPGTSGGSG
GFGGFGGSYR VRRSRAERTG DGVAGLVDRL LLACSVILVG WGLGVRPALA AAGTDGWSRA
VAAVYPAGAV LLVVAALHAT AFRRPPDRVR ILAAAVGLFL IAASTSWLRG PTDAAAFPAV
VGVVPIAGCA FVLLAVLRAA GGARVGTAGF VLPAAARAAG PEHAAGHAHA MDFGHAARFG
HAVGYGHTVL TRAGTGGVRG AGGGRAAGGG RGAGGADVGD AGDGSERWGF LLVPTLVAGC
ATATVLAGLA GGHRLDGIEI GLAAVVVAGM VADRLVAARA GRRLAQRVHA AEREIHHRVF
HDPLTELANR ALFQHRLRGA LTDRWRSGDD RSGGDIAILY CDLDDFSALN DSLGPAAGDH
LLRTVAQRLR HCVRTTDLVA RVGADEFAVL LAGGDESPEA VGERVLAALR HPMAVGGQPR
SIRASVGLAV ARRTHETGES LLRHAETAVH VAKCSGKNRL VTYRPGMASP EAGAHLADAL
ATALRRGGRS AGFDVHYQPI VRLRDGHPVA LEALARWTDP GRGPVPPGTF VAAAENGGMV
GLLDDLVLTR ACTEVALAYP AGSRLRLHVN VSASRITDTR LRDSVARVLA ASRLDPRRLV
VEVTETSRIA DLSAAADVLS GVRDLGVAIA LDDVGAGNTS LAVLHRLPVD VVKLDRTLIE
FPMDGSRVSN LRRSMIDVAH ALGAVVVAEG IERESQLVEL DRLGCELGQG FLFARPGPLS
GLPPIGGGSG DGEDGYGSGG GEGGSQKW
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