| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1114 |
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| Symbol | leuD |
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| ID | 5669527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1332209 |
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| End bp | 1332796 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240046 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001505474 |
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| Protein GI | 158312966 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.162514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.49413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGCGT TCACCATCCA CACCGGTCGG GCGGTGCCGC TGCGGCGCAG CGACGTCGAC
ACCGACCAGA TCATCCCGAG CGAATGGCTC AAGCGGATCG AGCGGACGGG CTTCGGTGCC
GGGCTGTTCT CCGAATGGCG GGCGGACCCG TCGTTCGTGC TGAACGACCC CGCCCACGCC
GGTGCGTCGA TCCTGCTCGC CGGCCCGGAC TTCGGCACCG GCTCGTCGCG TGAGCACGCG
GTCTGGGCGC TGCAGGACTA CGGCTTCCGC GCGGTGCTCT CGCCCCGCTT CGCCGACATC
TTCCGCGGCA ACGCGCTGGG CAACGGCCTG CTCCCGGTGG TGCTGCCGGC CGACACGGTC
GAGGCGCTGA CCGCGGCGGT GGAGGCCGAC CCGACCACGG AGATCACCGT CGACCTGGTG
GCCCGGGAGG TCCGCGGCGC CGGTCAGGTC GCCGGCTTCG AGCTCGACGA CTTCACCCGC
TGGCGGCTGA TGGAGGGCCT GGACGACGTC GGCCTGACGC TGCGCCACGA GCAGGACATC
ACCGTGTTCG AGGCCAGCCG GCCCGGGTGG CTCCCGACCA CGGCCTGA
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| Protein sequence | MEAFTIHTGR AVPLRRSDVD TDQIIPSEWL KRIERTGFGA GLFSEWRADP SFVLNDPAHA
GASILLAGPD FGTGSSREHA VWALQDYGFR AVLSPRFADI FRGNALGNGL LPVVLPADTV
EALTAAVEAD PTTEITVDLV AREVRGAGQV AGFELDDFTR WRLMEGLDDV GLTLRHEQDI
TVFEASRPGW LPTTA
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