Gene Franean1_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1100 
Symbol 
ID5669514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1314208 
End bp1314666 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content72% 
IMG OID641240032 
Productsignal-transduction protein 
Protein accessionYP_001505462 
Protein GI158312954 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTT CGGAGGGCAC GCGTGTTTCG GGGGATACAC GCGTTTCGGA GGATATGCGG 
GCTTCGGAGG GCGTGAGTGT CTCGGAGGGC ATGAGCGCTC TGGTCCTCGT CGTCGGGCCC
GGGCACACCC TGCGCCAGGC GGCCCGGCTG ATGGCCGCCC GGCACGTGGG TGCCGCCGTC
GTGCTCGACG GCGACGGCCA GGGGTTCGGA ATCCTCACCG AGCGCGACGT CCTGCGGGCG
ATCGCGGCCG ACCAGGATCC GGACGTCGAG GTCGTGGGCG ACCATGTCAC CCGGGACGTG
GTGGTCGCCG CCCCCGACTG GTCACTCGAC GAGGCGGCCG CGGCGATGCT GCGCGGCGGG
TTCCGGCACC TCGTGGTCAC CACCGGCGCC GAGGTCGAGG GCGTGCTTTC GATGCGTGAC
GTGGTGCGTT GCTGGAGTCG GCAGCGGGTG TCGGCCTGA
 
Protein sequence
MRVSEGTRVS GDTRVSEDMR ASEGVSVSEG MSALVLVVGP GHTLRQAARL MAARHVGAAV 
VLDGDGQGFG ILTERDVLRA IAADQDPDVE VVGDHVTRDV VVAAPDWSLD EAAAAMLRGG
FRHLVVTTGA EVEGVLSMRD VVRCWSRQRV SA