| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1098 |
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| Symbol | |
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| ID | 5669512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1311667 |
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| End bp | 1312695 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240030 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001505460 |
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| Protein GI | 158312952 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.51179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTTG CGGTCATTGG TGGCGACGGA ATCGGCCCGG AAGTGGTCGC GGAGGGGCTG
CGCGTGCTAC GCGCCGTGCA TCCCAAAGTG GAGACCACCG ACTACGACCT GGGCGCGCGG
CGCTGGCACG AGACCGGCGA GACCCTGCCC GACAGCGTCC TGGCGGAGCT GCGCGGGCAC
GACGCGATCC TGCTCGGCGC TGTCGGCGAC CCCGGGGTAC CCAGCGGCGT CCTGGAACGC
GGGCTGCTGC TGCGGCTGCG GTTCGAGCTG GACCACCACG TCAACCTCCG GCCGGTCCGG
CTGTACCCCG GAGTGACCTC ACCGCTCGCC GGTGACCCCG CCATCGACAT GATCGTGGTG
CGGGAGGGGA CGGAGGGCCC CTACGCCGGC GCCGGCGGCA CTCTGCGGCG CGGGACGCCG
CAGGAGGTGG CGACCGAGGA GAGCCTGAAC ACGCGCTTCG GGGTCGAGCG GGTCGTGCGC
GACGCCTTCG CGCGGGCGAG CCGGCGTCCC CGCGCCCACC TCACCCTGGT ACACAAGACC
AACGTGCTCA CCAAGGCGGG CGACCTGTGG GCCCGCACGG TCGCCGAGGT CGGCGCCGAG
TTCCCCGCCG TCAGCGTCGA CTACCAGCAC GTGGACGCCG CGTCGATGTT CTTCGTGACC
GACCCGGCCC GGTTCGACGT GGTGGTCACC GACAACATGT TCGGCGACAT CCTGACCGAC
ATCGGCGCCG CGATCACCGG CGGCATCGGG CTCGCCGCCA GCGGGAACCT CGACCCCTCG
GGCGCGAACC CGAGCATGTT CGAGCCGGTC CACGGCAGCG CTCCCGACAT CGCCGGCCAG
GGGCTGGCGG ACCCGACCGC GACGGTCGCC TCGGTCGCGA TGCTGCTGGA CCACCTCGGC
CACGCCGACG AGGCGGCCCG GGTGGAGGGC GCGGTGGCCG CGTCGCTGGC CGCCCGCGCC
GCGGCCGGCG GTGCCCGCCG CTCCACCCGC GAGATCGGCG ACGACCTGGC CACCCGCGCC
GCGGGCTGA
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| Protein sequence | MRLAVIGGDG IGPEVVAEGL RVLRAVHPKV ETTDYDLGAR RWHETGETLP DSVLAELRGH
DAILLGAVGD PGVPSGVLER GLLLRLRFEL DHHVNLRPVR LYPGVTSPLA GDPAIDMIVV
REGTEGPYAG AGGTLRRGTP QEVATEESLN TRFGVERVVR DAFARASRRP RAHLTLVHKT
NVLTKAGDLW ARTVAEVGAE FPAVSVDYQH VDAASMFFVT DPARFDVVVT DNMFGDILTD
IGAAITGGIG LAASGNLDPS GANPSMFEPV HGSAPDIAGQ GLADPTATVA SVAMLLDHLG
HADEAARVEG AVAASLAARA AAGGARRSTR EIGDDLATRA AG
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