| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1095 |
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| Symbol | |
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| ID | 5669509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1307791 |
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| End bp | 1309488 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641240027 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001505457 |
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| Protein GI | 158312949 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.57091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACAC CGCAGCAACC GTCCGGCATG CCCATTGAGA AGTACCGCCC GTTCCCGGCG
GTCGCGCTGC CGGACCGCAC CTGGCCCAAC GCCACGATCA CCGAGGCCCC GCGCTGGTGC
AGCGTCGACC TGCGGGACGG CAACCAGGCC CTGATCGACC CGATGACGCC GTCGCGCAAG
ATGCAGCTGT TCGAGCTGCT GGTCGCGATG GGCTACAAGG AGATCGAGGT CGGCTTCCCG
GCGGCGAGCC AGACCGACTT CGACTTCGTC CGTCAGCTGA TCGAGGATGA CCTGATCCCC
GACGACGTGA CGATCCAGGT GCTGACCCAG GCCCGCGAGG AGCTGATCGA GCGCACCGTC
ACCTCGCTGG TCGGTTCCGA CCGCGCTCTG ATCCATCTGT ACAACTCGAC CTCCACCCTG
CAGCGTCGCG TCGTGTTCGG CCTGGACCGG GCCGGCGTCA CCGACATCGC GGTGCAGGGT
GCCCGCTGGT GCGCCCAGTA CGCGGAGAAG CTGCTGGAGG GGACCGACGT CCGCTGGCAG
TACAGCCCCG AGTCGTTCAC CGGTACGGAG CTGGACTACG CCCTGGAGGT CTGCGAGGCG
GTGATGGACG TCTGGGCGCC GACCCCGGAC AACCCCGTCG TGCTGAACCT GCCCGCCACG
GTCGAGATGT CGACGCCGAA CGTGTACGCC GACCAGATCG AGTGGATGAG CCGCAACCTG
ACCCGCCGGG ACGCGGTGGT GCTGTCGCTG CACCCGCACA ACGACCGGGG CTGCGCGGTC
GCCGCGGCGG AGCTGGGCGT CATGGCCGGC GCCGACCGGG TGGAGGGCTG CCTGTTCGGT
AACGGCGAGC GTACCGGCAA CGTCTGCCTG GTCACGCTGG GGATGAACCT GTTCTCCCAG
GGCATCGATC CGATGATCGA CCTCTCCGAC ATCGACGGCG TGCGCCGCAC CGTGGAGTAC
TGCAACCAGC TGCCCGTGCA CCCGCGCCAT CCCTACGGCG GCGACCTTGT CTACACGGCC
TTCTCCGGCT CCCACCAGGA CGCCATCAAG AAGGGCTTCG AGGCGATGGA GCGGACCGGC
CAGACGCTGT GGGAGGTCCC CTACCTGCCG ATCGACCCGA AGGACGTCGG CCGCTCGTAC
GAGGCCGTCA TCCGGGTGAA CAGCCAGTCG GGCAAGGGCG GCGTGGCGTA CCTGATGAAG
TCGGAGTACG CGCTGGACCT GCCCCGCCGG CTGCAGATCG AGTTCTCGGG CGTGGTCCAG
AAGCACACCG ACGACGCCGG CGGCGAGGTC ACGGCCGGCC AGCTCTGGGA GATCTTCACC
CGGGAGTACC GGCCGGAGGG CGGGGACCCG GCGGCATCGC TGGAACTGCT CGGATCACGG
ACGACCGCGG CGAGCGGCGC ACGGGACGAG GTGACCGTCT CGGTACGCCT GGACGGCACG
GAGACGGTCA TCACGGGCAG CGGCAACGGC CCGATCGACG CGTTCGTGGC CGCGCTGTCC
GAGCGGGGTG TGCCGGTGCG CGTCCTCGAC TACAACGAGC ACGCGCTGGG TTCGGGCGCG
GACGCCCGTG CCGCGGCCTA CCTGGAGGTC GCGGTGGGGG AGACGGTGCT GTGGGGGGTC
GGGATCGACC CCAACATCGT CACCGCCTCG CTGCGCGCGG TCGTCAGCGC CGTGAACCGG
GCGTCCCGGG AGAGCTGA
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| Protein sequence | MITPQQPSGM PIEKYRPFPA VALPDRTWPN ATITEAPRWC SVDLRDGNQA LIDPMTPSRK
MQLFELLVAM GYKEIEVGFP AASQTDFDFV RQLIEDDLIP DDVTIQVLTQ AREELIERTV
TSLVGSDRAL IHLYNSTSTL QRRVVFGLDR AGVTDIAVQG ARWCAQYAEK LLEGTDVRWQ
YSPESFTGTE LDYALEVCEA VMDVWAPTPD NPVVLNLPAT VEMSTPNVYA DQIEWMSRNL
TRRDAVVLSL HPHNDRGCAV AAAELGVMAG ADRVEGCLFG NGERTGNVCL VTLGMNLFSQ
GIDPMIDLSD IDGVRRTVEY CNQLPVHPRH PYGGDLVYTA FSGSHQDAIK KGFEAMERTG
QTLWEVPYLP IDPKDVGRSY EAVIRVNSQS GKGGVAYLMK SEYALDLPRR LQIEFSGVVQ
KHTDDAGGEV TAGQLWEIFT REYRPEGGDP AASLELLGSR TTAASGARDE VTVSVRLDGT
ETVITGSGNG PIDAFVAALS ERGVPVRVLD YNEHALGSGA DARAAAYLEV AVGETVLWGV
GIDPNIVTAS LRAVVSAVNR ASRES
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