Gene Franean1_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1088 
Symbol 
ID5669502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1297921 
End bp1298895 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content73% 
IMG OID641240020 
Productmetallophosphoesterase 
Protein accessionYP_001505450 
Protein GI158312942 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGAT CGTCAGTGAT GCAATCGACC ACGCCGGGCC GGATGCCGGC GACCACACAG 
GGGCGGCTGC TCGCCACCAG TGACATCCAC GTCCGCCATC CCGACAACCG GGCGATCGTC
GAGGCGATGC GCCCGGGCCG CCCTGACGAC TGGCTGCTCG TCGTCGGCGA CGTCGGGGAG
CTCTACGAGG ACGTCGAATG GGCACTGCGG CTGCTCGCCG ACCGCTTCGC GCAGGTCGTG
TGGGTACCGG GCAACCACGA GCTGTGGACG CTGGGGCGTG ACCAGACGTC GCTGCGCGGC
GAGGCGCGCT ACCGGCGCCT GGTCGACCTG TGCGCCGGGC TCGGCGTGCT CACCCCGGAG
GACCCCTACC CACTGTGGAC GGGTCAGGGC GGCCCGGCGC GCATCGTGCC GATGTTCCTG
CTCTACGACT ACACGTTCCG GCCCGAGGGC ACCTCGACCA AGCGGGAGGC ACTCGCCGCC
GCCTACGAGG CCGGCATCGT GTGCTCGGAC GAGTCGGTCC TCTTCCCCGA CCCGTACCCG
ACCCGGGACG ACTGGTGCCG GGCCCGGGTC GAGCTGACCC GGCGGCGGCT CGACGCGTGC
CCGCGCGACG TCCCGCTCGT TCTCGTGAAC CACTTCCCGC TGGTGCGGGA GCCGACCAGG
ATCCTGCGCT ACCCGGTGTT CGCCCAGTGG TGCGGCACCG AGCTGACCGC GGACTGGCAC
ACCCGCTACA ACGTCGCCGC CGTGGTCTAC GGGCACCTGC ACATACCGCG GACGACCTGG
TACGACGGGG TCCGGTTCGA GGAGGTCTCG GTCGGCTACC CGCGCGAGTG GCGGGCCTGG
CCGGCCCGCC GGCCGGTGCT GCGCCAGATC CTGCCGGCGC CGACGGGCGA GCCGGTGCCC
CCGTGGGGGG CGCCCCGGGA CGAGTCCGCC GCCGCGGCGA TCCGGTCCGG GCTGGCAACG
GATCGGGCGG ATTAA
 
Protein sequence
MRRSSVMQST TPGRMPATTQ GRLLATSDIH VRHPDNRAIV EAMRPGRPDD WLLVVGDVGE 
LYEDVEWALR LLADRFAQVV WVPGNHELWT LGRDQTSLRG EARYRRLVDL CAGLGVLTPE
DPYPLWTGQG GPARIVPMFL LYDYTFRPEG TSTKREALAA AYEAGIVCSD ESVLFPDPYP
TRDDWCRARV ELTRRRLDAC PRDVPLVLVN HFPLVREPTR ILRYPVFAQW CGTELTADWH
TRYNVAAVVY GHLHIPRTTW YDGVRFEEVS VGYPREWRAW PARRPVLRQI LPAPTGEPVP
PWGAPRDESA AAAIRSGLAT DRAD