| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1083 |
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| Symbol | |
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| ID | 5669497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1290842 |
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| End bp | 1293547 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 641240015 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001505445 |
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| Protein GI | 158312937 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.308427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCCGT CCCCGACGCG TCGAGGGATC GACGCGGGGC CGTTCCGGTC GCCGCTGATG
CGCGCCCCGC GAGCCGGCGG CGTGCCGCCG GAGCCAGGGG CCGGGTGGGG GGCCGCGGTC
GGCGCGGCGG GATGCCTGAC GGCCGCGGTG GTCGCCGTCG CCGGGGGCTG GCGCGGTGCC
TTCGACAACC TGGGCGCGGC CTTCGTGCTG ATCGCCGGGC TCGCCCTTCT CGTCGGGTCG
CAGCAGGTGC CCGCCGGTGG GGCCTGGCCG GGCGCCTTCG GGCCGGCCGG TCTGCCGGCG
GGCGCGCTGG GTGCCCGGCG CCGAGCGGGC GGACCGGGCG CCGGCGGCAG TGATCTCACG
GTGACCTTCC TGTTCGCGCT CCTGCTCGGT TGGGGAACGC CGCCCGCGCT GGCGGCGCAC
CTGGTCGTCG GCGTCCTGCT GGAGCTCGTG CGGGGCGCGC GCCCGCGGTG GGTGATGGTG
GTCGTCGGGC GCCGCTCGCT GGCGCTGTGC GCGGCGGGAG CCGTGGTGGC CGCGTACGGC
CTCGGAGCCG ATCTCGGGGC CGGGGATCTG CCCGAGGTCG CGCTCGCCGG CCTCGCGCTG
TTCGCCGTCG ACGACCTGCT CGGCCTGCCT ACGCACCCGC GCGGGCCGGC GGCCGTCGGC
GGCGCGGCCG GCCGTGGCGG GGGCCGTGCC CACGCCGGGT GCCGGGCTCC CCTCGCCGAC
CTGCGGCGCC GGGTGGCAGG CGGGGTGGCG ACGCTGTCCC TCGCGCCGCT GGTGGTGGTA
GCCGCGGCGC GAAGCGCCTG GCTGGTGCCG CTGCTGCTGC CGGCGCTGCT GGTGGTGGCC
CGGGTCGGTG AGGTCTCCCG GCAGAAGGAG CACGAGGCCC GCCACGACGG GCTCACCGGG
CTGCCGAACC GGGCGGAGCT CGCCGAGCGC GCGGCCGCCA GCTTCCGCGC GGCCGAGCGG
ACCGGCTGCC GGGTCGGCCT GCTGCTGCTC GACCTGGACC GGTTCAAGGA GGTCAACGAC
CGGCTGGGGC ACGAGGTCGG TGACCGGCTG CTGGTCGTCG CCGCGGCCCG GCTCACCGCC
GCGCTGCGCC CCGGTGACGT CGTCGCGCGG CTGGGCGGCG ACGAGTTCGC CGTCCTGCTG
CCCGCGCTGC CGGCCGGCGA GGCGGGCCGG ACGGTGGTCG GGGAGGTGGC CGGGCGCGTC
CGCGGCGTGC TGCGTGCCCC GTACGAGATC GACGGGCAGT TCTGCGACGT CGATGCGAGC
GTCGGGGTCG CGCTCTACCC GGACCACGGC GGCGACCTTC CCGCGCTGTC GCGGTGCGCC
GACCTCGCCA TGTACACCGC GAAGGAGCAC CGCCTCGGCG TCCAGGCCTA CGGGCCGCGT
GACGCCAGCC GTGCCCGGCT ACGGGCCCGG ACGACCGCCG AGCTCGGCTA CGCCCTGGAG
CACGGGCAGC TCGAGGTGCA CTACCAGCCG CAGGCGGAGA TCGCCGACGG GCGGGTGCGG
CGGGTCGAGG CGCTGCTGCG CTGGCGGCAC CCAAGCCGGG GGCTGCTGCT GCCGGGAGTC
TTCGTCCCGC TCGCCGAGTC CGCCGGCCTG ATCCGGCCGA TCACGTCGTG GGTGATGGGC
CGCGCGCTCG CGCAGGTCGC CCGGTGGAAC GCGGTGGGTA TCCCGGTGGC GGTCGCGCTG
AACGCGTCCG CGCGTGACCT GCGCGACCCC GGCTTCGTCG GCTCGGTCGC GGCCGCGCTG
GCCGAGACCG GCCTGCCGGC TGCGGCGCTG ACCTTCGAGG TCACCGAGGG CGCCGTCACC
GCGGACGGCG ACGAGCCGGC CGGGGCGCTG CGCGACCTGG CGGACCTCGG TGTGCGGGTC
AGCCTGGACG ACTTCGGCAC CGGCCGGGTC TCCCTCGACG CGCTGCGGCG CCTGCCGTTC
GAGGAGATCA AGATCGACCG GACCGTGATC GGCCGGATGG CGGGCGCCGA CCGCGACGCC
GACTTCGTCC GCGCGGTCGT TCGGATGGCC GCGGACCTGG GGCTGCGGGT CGTCGCCGAG
GGCGTGGAGA CCCCCGTCGA ATGGCGCCGG CTGGCCGGCT TCGGTGCGGA CGCGGCCCAG
GGGTGGCACG TGGCGCCCGC GCTGCCCGCG GTGCTGCTCA CCCCGTGGCT CGCCGCCGCG
TCGGCGGAAA CGGCCGCGCC GCCGCGGCCG GCAGCCGCGG TCAGCGGCGC GCAGCCGTGC
TCAGCGGCCG GGGCCGGCCG TGCGGGCGAG GGTGGCGGCG ATGCCGGCCA GGTGCGCGAG
CCGGGCCACC TCGGAGGAGC GGAACGCGGG GCCTCCCGGC CGGCCGACCA GGACGGCCAG
CCGTTCGTGC CCGACCGGGG CCGCGGCGAG CTCCATGTTG ACCGCCTCCC AGCGGGCCGG
GAACTCGCCG TCGTCCGGCA CGACGCGCCG CGCCGCGCGC AGCGGCAGCC AGGGCAGCGG
GAGGCGCACC CGCTCCGGAA CACCGAGGTC GTCGCCGCCC AGGCTCGGCG CGCCCACCGA
GGCCTCCCGG ACCCGGACGT CGCCCGGCCC CAGGTGCTCG AGCAGCAGCG CCCAGTCGGC
GTAGAAGACC CCCGCGACCA GGTCGGTCAG CACGGCCACG GCGTCGGCGG GGCGTTCGGT
GAGCGCGTCG ACGAGCTCGA GGTCCTCGCT GATCCCGGCG CCGTCGGCCT GGTAGGGCCG
CAGTGA
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| Protein sequence | MRPSPTRRGI DAGPFRSPLM RAPRAGGVPP EPGAGWGAAV GAAGCLTAAV VAVAGGWRGA
FDNLGAAFVL IAGLALLVGS QQVPAGGAWP GAFGPAGLPA GALGARRRAG GPGAGGSDLT
VTFLFALLLG WGTPPALAAH LVVGVLLELV RGARPRWVMV VVGRRSLALC AAGAVVAAYG
LGADLGAGDL PEVALAGLAL FAVDDLLGLP THPRGPAAVG GAAGRGGGRA HAGCRAPLAD
LRRRVAGGVA TLSLAPLVVV AAARSAWLVP LLLPALLVVA RVGEVSRQKE HEARHDGLTG
LPNRAELAER AAASFRAAER TGCRVGLLLL DLDRFKEVND RLGHEVGDRL LVVAAARLTA
ALRPGDVVAR LGGDEFAVLL PALPAGEAGR TVVGEVAGRV RGVLRAPYEI DGQFCDVDAS
VGVALYPDHG GDLPALSRCA DLAMYTAKEH RLGVQAYGPR DASRARLRAR TTAELGYALE
HGQLEVHYQP QAEIADGRVR RVEALLRWRH PSRGLLLPGV FVPLAESAGL IRPITSWVMG
RALAQVARWN AVGIPVAVAL NASARDLRDP GFVGSVAAAL AETGLPAAAL TFEVTEGAVT
ADGDEPAGAL RDLADLGVRV SLDDFGTGRV SLDALRRLPF EEIKIDRTVI GRMAGADRDA
DFVRAVVRMA ADLGLRVVAE GVETPVEWRR LAGFGADAAQ GWHVAPALPA VLLTPWLAAA
SAETAAPPRP AAAVSGAQPC SAAGAGRAGE GGGDAGQVRE PGHLGGAERG ASRPADQDGQ
PFVPDRGRGE LHVDRLPAGR ELAVVRHDAP RRAQRQPGQR EAHPLRNTEV VAAQARRAHR
GLPDPDVARP QVLEQQRPVG VEDPRDQVGQ HGHGVGGAFG ERVDELEVLA DPGAVGLVGP
Q
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