Gene Franean1_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1081 
Symbol 
ID5669495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1287532 
End bp1288650 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content77% 
IMG OID641240013 
Productmethionine synthase vitamin-B12 independent 
Protein accessionYP_001505443 
Protein GI158312935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.17539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGGT CTGCCACCGA GCGGGGCGCG GGCCCGGAGC CGATCCGGGA CGTGCCGGGG 
GAGGGTGTCT CATCGCTGGG CAGCGACGGG ACCGCCGAGC GGGCGGGCAT CCCCTGGCCG
CCCGGGACGG CCTCCGGGGT CGGGTCGCTG CCGGATCTCG ACCCGGTCGA GGCCGCGCGG
TACGTCCTGG GGGAGGTGCC GGACCTGCCG TTCCTGCCGG AGCTGCCGGG CCGCGGGGTC
GGCGCCGACA TCATCGGCCG TTCGTGCGCG CTGCTGGTGG ACCTGCCGGT CGACTTCCAG
CCGTCCGGGT GGCGGCTGGT GCCGCGGCCC GGCCTGGACC TGCGCCGGGC CCGTGACCTG
CTCGCCCGGG ATCTGGACGC GTTCACCGAG GCGGCCGCCG ACTACACCGG GCCGCTCAAG
GTGTCGGCCG CGGGCCCCTG GACGCTGGCC GGCGGGGTCG AGCTGCCGCG CGGGCACAAG
GCGCTCGCCG ATCAGGGCGC GGCCCGGGAC CTGGCCGAGG CGCTCGCCGA GGGGCTGGTC
GCCCACCTGG CCGACCTGGG GCGACGGATT CCGGGTGCCC GGCTGCTCGT CCAGCTCGAC
GAGCCGTCGC TGCCGGCTAT GCTCGCCGGC CACATCCGCA CTCCCAGCGG GTTCTCCGTC
CTGCCCGCCG TCGAGGAGGG GCCGGCGACC GAGCGGCTGG CCGGCGTGCT GTCCGCGGTG
ACCGGGGTGG CGTCGGTCGC CGCGTCCGGC GTGCACTGCT GCGCGCCGGA CGTGCCGCTC
GACCTGCTGC GGCGGGCCGG CGCGCGGTTC GTCGGCCTCG ACGCGACCCT GCTCACCCGG
GCGCAGGACG ACGCGGTCGG CGAGGCGGTC GAGGCGGGCG TCGGCCTGAT GTTCGGCCTG
GTGCCGACGG ACGTGGCCGG GAACCTGTCG GACCCCCGTC GTACGGTCGC GGTGGCGGTC
GACCTGTGGC GTCGGCTGGG GTTCGCTCCG GAACTACTCG GGGAGGTGGT GGCCGTGACA
CCGACGTGTG GTCTGGCCAA TGCCAGGGTG GGTGACGCGC GCGCCGCGCT GCGGCACTGC
CGTGAGGCGG CGCGGGTCCT GGTGGAATCT CCACAGTGA
 
Protein sequence
MTWSATERGA GPEPIRDVPG EGVSSLGSDG TAERAGIPWP PGTASGVGSL PDLDPVEAAR 
YVLGEVPDLP FLPELPGRGV GADIIGRSCA LLVDLPVDFQ PSGWRLVPRP GLDLRRARDL
LARDLDAFTE AAADYTGPLK VSAAGPWTLA GGVELPRGHK ALADQGAARD LAEALAEGLV
AHLADLGRRI PGARLLVQLD EPSLPAMLAG HIRTPSGFSV LPAVEEGPAT ERLAGVLSAV
TGVASVAASG VHCCAPDVPL DLLRRAGARF VGLDATLLTR AQDDAVGEAV EAGVGLMFGL
VPTDVAGNLS DPRRTVAVAV DLWRRLGFAP ELLGEVVAVT PTCGLANARV GDARAALRHC
REAARVLVES PQ