Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1081 |
Symbol | |
ID | 5669495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1287532 |
End bp | 1288650 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641240013 |
Product | methionine synthase vitamin-B12 independent |
Protein accession | YP_001505443 |
Protein GI | 158312935 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.17539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTGGT CTGCCACCGA GCGGGGCGCG GGCCCGGAGC CGATCCGGGA CGTGCCGGGG GAGGGTGTCT CATCGCTGGG CAGCGACGGG ACCGCCGAGC GGGCGGGCAT CCCCTGGCCG CCCGGGACGG CCTCCGGGGT CGGGTCGCTG CCGGATCTCG ACCCGGTCGA GGCCGCGCGG TACGTCCTGG GGGAGGTGCC GGACCTGCCG TTCCTGCCGG AGCTGCCGGG CCGCGGGGTC GGCGCCGACA TCATCGGCCG TTCGTGCGCG CTGCTGGTGG ACCTGCCGGT CGACTTCCAG CCGTCCGGGT GGCGGCTGGT GCCGCGGCCC GGCCTGGACC TGCGCCGGGC CCGTGACCTG CTCGCCCGGG ATCTGGACGC GTTCACCGAG GCGGCCGCCG ACTACACCGG GCCGCTCAAG GTGTCGGCCG CGGGCCCCTG GACGCTGGCC GGCGGGGTCG AGCTGCCGCG CGGGCACAAG GCGCTCGCCG ATCAGGGCGC GGCCCGGGAC CTGGCCGAGG CGCTCGCCGA GGGGCTGGTC GCCCACCTGG CCGACCTGGG GCGACGGATT CCGGGTGCCC GGCTGCTCGT CCAGCTCGAC GAGCCGTCGC TGCCGGCTAT GCTCGCCGGC CACATCCGCA CTCCCAGCGG GTTCTCCGTC CTGCCCGCCG TCGAGGAGGG GCCGGCGACC GAGCGGCTGG CCGGCGTGCT GTCCGCGGTG ACCGGGGTGG CGTCGGTCGC CGCGTCCGGC GTGCACTGCT GCGCGCCGGA CGTGCCGCTC GACCTGCTGC GGCGGGCCGG CGCGCGGTTC GTCGGCCTCG ACGCGACCCT GCTCACCCGG GCGCAGGACG ACGCGGTCGG CGAGGCGGTC GAGGCGGGCG TCGGCCTGAT GTTCGGCCTG GTGCCGACGG ACGTGGCCGG GAACCTGTCG GACCCCCGTC GTACGGTCGC GGTGGCGGTC GACCTGTGGC GTCGGCTGGG GTTCGCTCCG GAACTACTCG GGGAGGTGGT GGCCGTGACA CCGACGTGTG GTCTGGCCAA TGCCAGGGTG GGTGACGCGC GCGCCGCGCT GCGGCACTGC CGTGAGGCGG CGCGGGTCCT GGTGGAATCT CCACAGTGA
|
Protein sequence | MTWSATERGA GPEPIRDVPG EGVSSLGSDG TAERAGIPWP PGTASGVGSL PDLDPVEAAR YVLGEVPDLP FLPELPGRGV GADIIGRSCA LLVDLPVDFQ PSGWRLVPRP GLDLRRARDL LARDLDAFTE AAADYTGPLK VSAAGPWTLA GGVELPRGHK ALADQGAARD LAEALAEGLV AHLADLGRRI PGARLLVQLD EPSLPAMLAG HIRTPSGFSV LPAVEEGPAT ERLAGVLSAV TGVASVAASG VHCCAPDVPL DLLRRAGARF VGLDATLLTR AQDDAVGEAV EAGVGLMFGL VPTDVAGNLS DPRRTVAVAV DLWRRLGFAP ELLGEVVAVT PTCGLANARV GDARAALRHC REAARVLVES PQ
|
| |