Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1078 |
Symbol | |
ID | 5669492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1284352 |
End bp | 1284858 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641240010 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001505440 |
Protein GI | 158312932 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACAGC CGAAACCGCT TCCGACCGAC CCGATCGCGG AGGCGCACCG GCAGTGGACC GCCCACGGAT GGGGGCCCGT CGCGGACGGC ATGGCCGCCG TCACCTCGCT GATGCGCGCG CAGCAGATCC TGCTCGCCCG GGTCGACGAG GTCCTGCGGC CCCTCGATCT CACCTTCGCC CGCTACGAGC TGCTCATGCT CCTGCTGTTC AGCCGCAAGG GCTCGCTGCC GCTGAGCCGC ATCGGGAGCC TGTTGCAGGT GCACCCGACC AGCGTCACCA GCGCCGTGGA CAGGCTGGAG GCCCGCGGGC AGGTGCGCCG CCTGCCGCAT CCGACGGATC GGCGCGCGAT CCTCGCCGAG ATCACCGAGG ACGGGCGGTC GACGGCGCTC GCGGCCACCG AGAAGCTCAA CGACACGGTG TTCGCCGACC CCGGGCTTCC TGACAGCGGT GTGCGGGACC TCGTCGAGCT GCTCACCGAC CTGCGGCGCG GTGCCGGCGA CTTCTGA
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Protein sequence | MSQPKPLPTD PIAEAHRQWT AHGWGPVADG MAAVTSLMRA QQILLARVDE VLRPLDLTFA RYELLMLLLF SRKGSLPLSR IGSLLQVHPT SVTSAVDRLE ARGQVRRLPH PTDRRAILAE ITEDGRSTAL AATEKLNDTV FADPGLPDSG VRDLVELLTD LRRGAGDF
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