| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1070 |
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| Symbol | |
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| ID | 5669484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1264459 |
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| End bp | 1266867 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239999 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001505432 |
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| Protein GI | 158312924 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.661135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTTA GCGTCGTTCC CATGATCCGC CCCGGCTCGG CCACCCCGCT CGGCGTGTGG
TGGGACGGCG AGGGAGTCAA CGTCGCCGTC GTGGCGCCCG GTGCCGACGC GGTGGATTTC
TGTGTGTTCG ACGGCCAGGA CGGCTCGGGC GGCCAGGACG GCTCGGGCGC CACCGGCCGC
ACCGGCCTCG GCACCGGCCC GGCCCCCGGA ACGGACGGTG GCGCGGAGAC CACTTCGGGT
GGTGAGACGC GGTACCGGCT TCCCGAACGG GACGGCGGTG TCTGGCACGG CTACATCCCC
GGGGTGGGCC CGGGGCAGGC CTACGGCCTG CGGGCTCATG GGCCGTACGC GCCCGGGCGC
GGCGAGCGGT ACAACCCGGC GAAGCTGCTG CTCGACCCCT ATGCGCGCCG GGTCACGGGG
AGCTTCGTGC CCCATCCGGC GGTGCACGGG TATGTGGCCG GCGATCCCTA CGGGCAGGAC
CCCGACAACC GGGACTCGGC ACCGTATGTG CCAAAGGGCG TCGTGACCGG ACCCGTCACG
CGGCCTCCCG CGGGATCCGT CGCGGGGTCT GCCGCCGGGT CCGTGACGGG GCCGGACCCG
GCCGCGAACA GGCCGCGGAC GGCCTGGGCC GACACGATCC TGTACGAGCT GCACGTCCGG
GGCTTCACCA TGCTTCACCC GGGGGTGCCC GAGCGGCTGC GCGGGACCTA CGCCGGCCTG
GCGCATCCGG CGGTCGTCGA CCACCTGCTG CGGATCGGTG TCACCGCGGT CGAGCTGCTG
CCCGTCCACG CGCACATCTC CGAGACGACG CTGCTGGAGA ACAGCCGCTC CAACTACTGG
GGCTACAACA CGCTGGCGTT CTTCGCCCCG CACCCCGGCT ACGCGGCCAC GGACGACCCC
GTCGCCGAGT TTCGCGCCAT GGTCGCCGCG CTGCACGACG CGGGTATCGA GGTGCTGCTC
GACGTCGTCT ACAACCACAC CGCCGAGGGC AGCGAGCGCG GGCCGACACT GAGCCTGCGC
GGGCTGGACA ACATCGCCTA CTACCGCGTC GAACCCACCG ACCCGCGCCG CTACCGCGAT
GTCACCGGCT GCGGGAACAC CGTCGACGCC ACGTCGCCAC ACGTCGTGCG CCTGATCTGC
GACTCGCTGC GGTACTGGGT GTCCGAGATG GGGGTGGACG GGTTCCGCTT CGACCTGGCG
ACGGCGCTCG CGCGGTCACC GGACGGGTTC GAGCCGGCCG CGCCGCTGCT GACCGCGATC
CAGGCCGACC CGCTGCTGTC CTCGGTCAAG CTGATCGCCG AGCCGTGGGA CCTCGGCTGG
GGCGGGTACC AGGTCGGCGC GTTCCCGGCG CCGTGGGCCG AGTGGAACGG CCGGTTCCGC
GACACCCTGC GTGACATCTT CAGCGACCGC ACCGGCAGCG TGGCGGATCT CGGATACCGG
ATCACCGGCT CGTCCGACAT CTACGAGCAT TCGGGACGCC GGCCCTGGGC CTCGGTCAAC
TTCGTCACCG CGCACGACGG TTTCCCCCTC GCCGACCTGG TCTCGTACAA CGAGAAGCAC
AACGAGGCCA ACGGGGAGGG CAACCGGGAC GGGGAGTCGG AGAACCGGTC GTCGAACCAC
GGCGCCGAGG GACCGACGGA CGACCCGAAG ATCCTCACGA ACCGCCGCCG GGCCCGCCGG
GCCCTGATCA GCACGTTGCT GCTGTCGGCC GGTGTGCCGA TGCTGCTCGC CGGCGACGAG
CTGGGACGTT CGCAGGGCGG CAACAACAAC GCCTACTGCC AGGACAACGC GGTCTCCTGG
CTCGCCTGGC CGAACGGAAC GGCAGGAACC CCCGAGGCCG GTGGGCCCGG CGATGGGCCG
GCCAGCGAGG TGCCGGCCAG CGAGGTGCCG GCCGCGGATC CGGCAGGTCC TGATCCGGCG
CTGGTCACGT TGGTGGGCGG GCTGAGCAGA CTGCGACGGG CCGCACCGGT GCTGCGGCGG
CAGCGGTTCT TCCGCGGTGG CGCGCCGACC CCGCAGCGGC TGCCCGACAT CACCTGGTTC
CGGCAGGACG GCGTGGTGAT GTCGGCCGCG GACTGGAACG CCCCGCAGGT GGCGATCCTG
GTGGCGCACC TGGCCGGGGA GGGCATCGAG TGGACCGACG CCGCGGGCAC GCCGGTCACC
GGGGAGAGCC TGCTGTTGGT CATCCATCCT GAGGGCGAGG ACCGGACGGT CGTGCTTCCC
GGGGCGCCCT GGGCGACCTG GTACGACCTG CTGCTCGACA CCGCCGCGGA CGACCTCGCC
GGGTTCCCGG ACACGATCAC CGAGCCCCGC CGGACACTGG CGGCCGGCGC GCAACTCGAC
GTGGCCGGAC GAACGGTCCT CATCCTGCGG GCCCTCGGCG GCTCCGATCG CAGTGTGGCG
GCTGAGTGA
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| Protein sequence | MAVSVVPMIR PGSATPLGVW WDGEGVNVAV VAPGADAVDF CVFDGQDGSG GQDGSGATGR
TGLGTGPAPG TDGGAETTSG GETRYRLPER DGGVWHGYIP GVGPGQAYGL RAHGPYAPGR
GERYNPAKLL LDPYARRVTG SFVPHPAVHG YVAGDPYGQD PDNRDSAPYV PKGVVTGPVT
RPPAGSVAGS AAGSVTGPDP AANRPRTAWA DTILYELHVR GFTMLHPGVP ERLRGTYAGL
AHPAVVDHLL RIGVTAVELL PVHAHISETT LLENSRSNYW GYNTLAFFAP HPGYAATDDP
VAEFRAMVAA LHDAGIEVLL DVVYNHTAEG SERGPTLSLR GLDNIAYYRV EPTDPRRYRD
VTGCGNTVDA TSPHVVRLIC DSLRYWVSEM GVDGFRFDLA TALARSPDGF EPAAPLLTAI
QADPLLSSVK LIAEPWDLGW GGYQVGAFPA PWAEWNGRFR DTLRDIFSDR TGSVADLGYR
ITGSSDIYEH SGRRPWASVN FVTAHDGFPL ADLVSYNEKH NEANGEGNRD GESENRSSNH
GAEGPTDDPK ILTNRRRARR ALISTLLLSA GVPMLLAGDE LGRSQGGNNN AYCQDNAVSW
LAWPNGTAGT PEAGGPGDGP ASEVPASEVP AADPAGPDPA LVTLVGGLSR LRRAAPVLRR
QRFFRGGAPT PQRLPDITWF RQDGVVMSAA DWNAPQVAIL VAHLAGEGIE WTDAAGTPVT
GESLLLVIHP EGEDRTVVLP GAPWATWYDL LLDTAADDLA GFPDTITEPR RTLAAGAQLD
VAGRTVLILR ALGGSDRSVA AE
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