| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1069 |
|---|
| Symbol | |
|---|
| ID | 5669483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1261820 |
|---|
| End bp | 1264384 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641239998 |
|---|
| Product | alpha-glucan phosphorylase |
|---|
| Protein accession | YP_001505431 |
|---|
| Protein GI | 158312923 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.909638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGCGC TGCGCCGATT CACTGTCCGT GCCCAGCTCC CGGAGCAGCT CGCTGCGCTG
GGCGAGCTGG TTCTGAACCT TCGCTGGTCG TGGCATCCGG AGACCCTCGA CCTGTTCGAG
TCGGTCGATC CGGAGCTGTG GCGGGCCTGT GAGGGCGATC CCGTCCGGCT GCTCGGCGAG
GTCGACCACG ATCGGCTCGT GGCGCTCTCC GCCGACCGGA AGTTCCTGCG CCGGCTCTCC
GACGCCGCCG ACGACCTGCA GGAGTACCTG ACCTCCGACC TCTGGTACCA GAAGCAGGCG
ATCCCGGGCG CACCCAGCGC CATCGCCTAC TTCTCGCCGG AGTTCGGGAT CACCGAGGTC
CTCCCGCAGT ACTCGGGCGG CCTGGGCATC CTCGCCGGCG ACCACCTGAA GACCGCCAGC
GACCTCGGGG TGCCGATCAT CGGGGTCGGC CTGCTCTACC GGGCCGGCTA CTTCGTCCAG
TCGCTGTCGC GGGACGGCTG GCAGCAGGAG CGCTACCCCG GTATCGACCC GCACGGCCTG
CCGCTGACGC AGCTCACCGA CGACGAGGGC GCCCCGGTGA AGGTCGCCGT CGGCCTGCCC
GAGGGGCGCA CCCTGCACGC CCAGATCTGG AAGGCGCAGG TCGGACGGGT CCCGCTGCTG
CTGCTCGACT CCGACGTCGA GGACAACCAG TCCGCCGAGC GGGGCGTCAC CGACCGCCTC
TACGGCGGCG GGACCGACCA CCGGCTCCTC CAGGAGATGC TGCTGGGGAT CGGCGGCGTC
CGCGCGCTGC GCGCCTACGC GGCCGTCACC GGCTCGCCGG CGCCGGAGGT CTACCACACC
AACGAGGGCC ACGCCGGCTT CCTCGGGCTG GAGCGCATCC GCGAGCTCAC CGAGACCGGG
CTGAGCTTCG ACGAGGCGCT GGAGGCCGCC CGCGCCGGCA CGCTGTTCAC CACCCACACG
CCCGTGCCCG CCGGTATCGA CCGGTTCCCG AAGGACCTGG TGGCCCGCCA CTTCGGCGGC
GACAACAGCT GGCCCGGCGT CCCGGTCGAC CGGGTGCTCG AGCTCGGCGC CGAGCCCGAC
CCCAACGTGT TCAACATGGC CCACATGGGC CTGCGGCTGG CCCAGCGCTC CAACGGCGTC
AGCAGCCTGC ACGGCATCGT CAGCCGGGAG ATGTTCGCCG GCCTGTGGCC CGGCTTCGAC
CACGCCGAGG TGCCGATCGG CTCGGTGACC AACGGCGTGC ACGCCCCGAC CTGGGTCTCC
CGCTCGATCA CCGAGCTGGC CGACCGCCAG CCCGGCCCCG GCCTGCTCAG CGGCGGCGCC
GAGGCCTTCA CCCGGTTCGA CAAGGTGTCC GACGAGGCCA TCTGGGCGAC CCGGCGGGAA
CTGCGCGAGC AGCTCGTCGC CGAGATCCGG CGCCGGGTCC GCGTCTCCTG GCTGCAGCGC
GGCGCGGCCC CCGGCGAGCT CGACTGGGTC GAGTCCGTCT TCGACCCGGA CGTGCTCACC
ATCGGGTTCG CCCGCCGGGT GCCGTCCTAC AAGCGGCTCA CGCTGATGCT GCGCGACTCC
GAGCGCCTCA AGCGGCTCCT GCTGCACGCC GACCGCCCCG TCCAGATGGT CATCGCGGGC
AAGGCCCACC CGGCCGACGA CGGCGGCAAG CTGCTCGTCC AGCAGATCGT CCAGTTCGCC
GACAATCCGG CCGTGCGCCA CCGGATCGTC TTCCTGCCCG ACTACGACAT CGGCATGGCC
CGCTTCCTCT ACGCCGGCTG CGACGTCTGG CTGAACAACC CGCTGCGCCC GCTCGAGGCG
TGCGGCACGT CCGGGATGAA GGCGGCGCTC AACGGCTGCC TGAACCTCTC CATCCGGGAC
GGCTGGTGGG ACGAGATGTT CGACGGTCAG AACGGTTGGG CCATCCCGAC CGCGGACGGC
GTCGAGGACC CCGACCGCCG CGACGACATC GAGTCGGCGG CCCTGTACGA CCTGCTCGAG
AACACGGTGA CGGCGCGCTT CTACGACCGG GCGACGCCGA CGTCCGCCCC GCCGCGGTGG
ACGGCGATGG TCAAGCACAC CCTCTCCACG CTCGGCCCGC AGGTGCTGGC GACCCGGATG
GTGCGCGAGT ACGTCGAGCG TTACTACGTG CCCGCCGGGG TGTCGGCCCG CCAGGCCACC
GAGGGCGACC TCGCCGGGGC GCGCGACCTC GCGGCCTGGA AGCACCGAGT GCGCAGCGCC
TGGTCGGGCG TCCAGGTGCT CAACGTCGAC TCGGCCGGGC TCGGGGACAC CCCCCAGGTG
GGCCAGTCGC TGGTCGTGCG GGCGACGGTC GACCTCGGCG GGCTCGACCC GGCCGACGTC
GAGGTGATCG CCTCCTACGG CCGGGTGGAC GAGACCGACC GCATCATGGC GCCCGGCACG
CTCTCGCTGA CCGACGTGGG CGAGGGGGAG GGCGGCCACG GCCACCGGTA CGAGGGCACG
ATCCCGCTCG GCCGGACCGG CCCCTTCGGC TACACGGTGC GAGTCCTGCC CCGCCACCGC
CTCACCGCAA GCCCAGCCGA ACTCGGCCTG GTCACAAACC CCTGA
|
|---|
| Protein sequence | MRALRRFTVR AQLPEQLAAL GELVLNLRWS WHPETLDLFE SVDPELWRAC EGDPVRLLGE
VDHDRLVALS ADRKFLRRLS DAADDLQEYL TSDLWYQKQA IPGAPSAIAY FSPEFGITEV
LPQYSGGLGI LAGDHLKTAS DLGVPIIGVG LLYRAGYFVQ SLSRDGWQQE RYPGIDPHGL
PLTQLTDDEG APVKVAVGLP EGRTLHAQIW KAQVGRVPLL LLDSDVEDNQ SAERGVTDRL
YGGGTDHRLL QEMLLGIGGV RALRAYAAVT GSPAPEVYHT NEGHAGFLGL ERIRELTETG
LSFDEALEAA RAGTLFTTHT PVPAGIDRFP KDLVARHFGG DNSWPGVPVD RVLELGAEPD
PNVFNMAHMG LRLAQRSNGV SSLHGIVSRE MFAGLWPGFD HAEVPIGSVT NGVHAPTWVS
RSITELADRQ PGPGLLSGGA EAFTRFDKVS DEAIWATRRE LREQLVAEIR RRVRVSWLQR
GAAPGELDWV ESVFDPDVLT IGFARRVPSY KRLTLMLRDS ERLKRLLLHA DRPVQMVIAG
KAHPADDGGK LLVQQIVQFA DNPAVRHRIV FLPDYDIGMA RFLYAGCDVW LNNPLRPLEA
CGTSGMKAAL NGCLNLSIRD GWWDEMFDGQ NGWAIPTADG VEDPDRRDDI ESAALYDLLE
NTVTARFYDR ATPTSAPPRW TAMVKHTLST LGPQVLATRM VREYVERYYV PAGVSARQAT
EGDLAGARDL AAWKHRVRSA WSGVQVLNVD SAGLGDTPQV GQSLVVRATV DLGGLDPADV
EVIASYGRVD ETDRIMAPGT LSLTDVGEGE GGHGHRYEGT IPLGRTGPFG YTVRVLPRHR
LTASPAELGL VTNP
|
|---|
| |