| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1061 |
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| Symbol | |
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| ID | 5669475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1250929 |
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| End bp | 1252746 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239990 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_001505423 |
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| Protein GI | 158312915 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00105103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGA CACCCGGCGG CCGACCGACC CCTCAGGTCG ACCGCACCTC CCGGTTCGGC
TTCGGCCGGA ATCCCGCGGG CGCCCCGGCG TCCCGGCCGC CGCGGCCGCG CCGCCGGCAC
CGCTTCGGCC GTGGGCCGCG GCTTGGCCTG GCAGCCGGCT TCGTGCTGGC GCTGTCCCTG
CCGCTGGTGG CGCCGGCCGG TGCCGCGCCG ACGGCCGCCA CGCCGACACC GTCGCCCACC
GTGGGCACGA CCCCGGAGGC TGACGGAACC TCGTCGCCCG TGCCGTCCTC GTCGGCCGGG
GGTGTCGCCG ACCAGCAGGT CCCGGTCGCC GGCCTGACCT CCGGCCCGGC CACCGCCGGG
CAGTCGAAGC TGACTCTCGT CCTGTTCGAC AGCGACATCG TGCTCGTCGG CGGGCGTGGC
TTCGGGCCCG GCAAGGACGT GGCGGTCACC GCCGCGACCA CCGACCTCGG TGGCTCCGCG
AGCGCCCGGG CCGGCGCGGA CGGCCGGTTC ATCCTCGGCT TCCAGGTGCC GCTCGGTTTC
TCCGGCCGGG TGACCGTGAC GGCGAAGCAG GAGTCGGTGG AGGCCAGCGG CACGCTCGAC
GTCGTCGACG CTGGCACGCC GGGCCTGGCG AACGGGGCGG CCAACGGCGC CGAGGTCCCC
GCACCAGCCC CGACGGCGAG TCCTGTCCCG GGCCCCGCGG CCACCCCGGC GCCGACGACC
GCCGAGCCCA CGACTTCGGA GCCCACGACT TCGGAGCCCA CGGCCTCCGG GCCCACCAGC
TCGGAGCCGA CGGGCACCGC TCGGGCCACC ACCCCCCCGA GCACCGGCCG GCGGGGCTCG
TCGGCGCCGA CCGCCGTACC CGCGCCAGCG CCCACGGCCG CGCCGTCGGC GGGGAGCGGG
ACGGGCACCG GCACCACCAC CGGCGGCACC GGCCGGCTCT CCGGCCTGCC CTGGATGTCC
GGCGTCTACC CGTCGCACGT CCTGTCGCAG GTCATGTCCT TCGGGACGTG GCGCGGGCGG
GCGAACGACG TGGCGCACGT GTTCACCGTC CGTACCCAGG GCTGGAACGC GATGGTCGAG
CCGCGCTGGC CGCTGGACCT GTACAAGGCC TTCCCGGGCA AGCTGATTAT CAGCCAGCCG
ACCTATCCGA AGGGCCAGGG CAACAACGCG GCCTGCGCCC GCGGCGAGTA CGACAGCTAC
TGGAAGACCT TCGGCACGTT CCTCAAGAAC AACGGCCGCG CCGATTCGAT CGTCCGCATC
GGCTGGGAAT TCAACGGCAA GTTCATGTAC TGGCACTCGG ACCCGGCCGG GACGGAGTTC
CGCGACTGCT TCCGCAAGAT CTCGACTGCC ATCCGCTCGA CGGACCCCGC GGTGAAGATC
GACTGGACGT TCAACGCGCA CGCCTCGCCG GTTCCCAACG GGGGCACCCC GTGGGCGGCC
TACCCTGGTG ACGAGTACGT CGACTATGTC GGCATCGACT CCTACGACTG GTACCCGCCG
TCGCGGGACG AGGCCACCTG GAAGAAGCAG TGCGAGGACC CGAACGGCCT GTGCTACCTG
CTCGAGTTCG CCCGCCAGCA CGGCAAGAAG GTGGGCGTGG GCGAATGGGG CGTGTCCTCG
TGCAGCCGCA ACGGCGGCGG TGACAACCCC TTCTACATCC AGAAGATGTT CGACACGTTC
ACGAAGTACG CGGACGTGAT GGCGTACGAG TCGTACTTCC ACGACGCGGC GCCCGGCAAC
GTCTGCTCGA CCATCATGAA CGGCGGCCAG AACCCGAAGG CGTCCGCCCT GTACAAGAAA
CTGTTCGGCT CGGTCTGA
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| Protein sequence | MASTPGGRPT PQVDRTSRFG FGRNPAGAPA SRPPRPRRRH RFGRGPRLGL AAGFVLALSL
PLVAPAGAAP TAATPTPSPT VGTTPEADGT SSPVPSSSAG GVADQQVPVA GLTSGPATAG
QSKLTLVLFD SDIVLVGGRG FGPGKDVAVT AATTDLGGSA SARAGADGRF ILGFQVPLGF
SGRVTVTAKQ ESVEASGTLD VVDAGTPGLA NGAANGAEVP APAPTASPVP GPAATPAPTT
AEPTTSEPTT SEPTASGPTS SEPTGTARAT TPPSTGRRGS SAPTAVPAPA PTAAPSAGSG
TGTGTTTGGT GRLSGLPWMS GVYPSHVLSQ VMSFGTWRGR ANDVAHVFTV RTQGWNAMVE
PRWPLDLYKA FPGKLIISQP TYPKGQGNNA ACARGEYDSY WKTFGTFLKN NGRADSIVRI
GWEFNGKFMY WHSDPAGTEF RDCFRKISTA IRSTDPAVKI DWTFNAHASP VPNGGTPWAA
YPGDEYVDYV GIDSYDWYPP SRDEATWKKQ CEDPNGLCYL LEFARQHGKK VGVGEWGVSS
CSRNGGGDNP FYIQKMFDTF TKYADVMAYE SYFHDAAPGN VCSTIMNGGQ NPKASALYKK
LFGSV
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