| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1050 |
|---|
| Symbol | |
|---|
| ID | 5669464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1232081 |
|---|
| End bp | 1233469 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641239979 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505412 |
|---|
| Protein GI | 158312904 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
|---|
| TIGRFAM ID | [TIGR02457] trehalose synthase-fused probable maltokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.729107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACC ACCACTCCGA GCTCACGGCC CTGCTCTCGG ACTGGCTGCC CAGGCAGCGC
TGGTTCGCGG GCAAGGGCCG GCCGGGCGGG AGGCTGCGCG TCGGGCAGGA CGTCCGCCTC
AGCTTCGACG CGGCGGTGAA GGCGGCGATG CACCTGCTGG TGGTGGAGGT CCGCTACGAC
GACGGCGGCC TCTCCGACCA CTACCAGGTC CCGGTGGTGA TCCGGCCGGA CGCCCCCTTC
GGCCACGAGG GGTTCCTCAT CGGCGAGTCG TCGGTGGGCC TGGTCTACGA CGGCCTGCAC
GACTCCGACG GAAGCGCCGC CCTGCTGGAC TACCTGCGCC GGGGCGCGAG CCGCGAGGGG
CTGACCGCGA CGGCGGTCGA GTCGTTGGAC GACCTGCCCG CGCACGCGGT CGGCGCCGAG
CAGTCGAACA CCTCGATCGT CTACGGCGAC GCCTACATCC TGAAGGTCTT CCGCCGCCTG
TGGCCCGGGA CGAATCCCGA TCTGGAGATC ACCCGGGTTC TGGCGCGCGC CGGCAGCGAG
CACGTGGCCC GGCCGGTGGC CTGGCTGAGC GGGCAGCTCT CCGGCGTCCC GACGACCTTC
GCGTTCATGC AGGACTTCCT GCGCACCGGG GCCGAGGGCT GGCTGCTGGC CCTGGCCAGC
GTCCGCGACC TCTACGCCGA GGGCGACCTG CACGCCGACG AGGTGGGCGG CGACTTCGCC
GCCGAGGCCG AGCGGCTGGG CGCCGCGACC GCCCAGGTGC ACCGCGACCT GGCCGCCGCG
CTGCCGACCC GGCCCGCCGA CGCCGCCGCG CTCGGCGAGG TCGCCGACTA CCTGCACAGC
CGGCTCGACG CCGCGCTGGC GGCCGTGGCG GAGCTCGCGC CGTTCGAGGC CGCACTGCGG
ACCGCCTACG ACGAGGTCCG CCGCGCCGAC CACGCGGCGC CGTTCCAGCG CATCCACGGC
GACCTGCATC TCGGCCAGGT GCTGCGGGTG GAGTCGGGCT GGGTGCTGTT CGACTTCGAG
GGTGAGCCGG CGCGGCCGGT GCCCGAGCGG ACCCTGCTCG AATCCCCGCT GCGCGACATC
GCCGGCATGC TCCGGTCGTT CGACTACGCG GCCCAGTCGA TGCTGCTCGA GCGCTCCGAC
GAGCCGTCGC TGGCCTACCG GGCGCTGGAG TGGGCCGACC GCAACCGGGA CGCCTTCTGC
CGCGGCTACG GCGCGGTGTC CGGCGCGGAT CCCCGGGACG GCGGCGCCGT CCTGCGTGGT
CTCGAGCTCG ACAAGGCTGT GTACGAAGTG CTCTACGAGG CGCGCCACCG GCCGGGCTGG
ATCAGCATCC CGCTGCGTTC GGTCGAACGG TTGACCGGCG GGCGACCCAC TGAGCTCCCC
GCGCCCTGA
|
|---|
| Protein sequence | MTDHHSELTA LLSDWLPRQR WFAGKGRPGG RLRVGQDVRL SFDAAVKAAM HLLVVEVRYD
DGGLSDHYQV PVVIRPDAPF GHEGFLIGES SVGLVYDGLH DSDGSAALLD YLRRGASREG
LTATAVESLD DLPAHAVGAE QSNTSIVYGD AYILKVFRRL WPGTNPDLEI TRVLARAGSE
HVARPVAWLS GQLSGVPTTF AFMQDFLRTG AEGWLLALAS VRDLYAEGDL HADEVGGDFA
AEAERLGAAT AQVHRDLAAA LPTRPADAAA LGEVADYLHS RLDAALAAVA ELAPFEAALR
TAYDEVRRAD HAAPFQRIHG DLHLGQVLRV ESGWVLFDFE GEPARPVPER TLLESPLRDI
AGMLRSFDYA AQSMLLERSD EPSLAYRALE WADRNRDAFC RGYGAVSGAD PRDGGAVLRG
LELDKAVYEV LYEARHRPGW ISIPLRSVER LTGGRPTELP AP
|
|---|
| |