| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1042 |
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| Symbol | |
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| ID | 5669456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1221972 |
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| End bp | 1222529 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641239971 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001505404 |
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| Protein GI | 158312896 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0444312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.958906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTCG TGGAAGGGTG GCGGCCCGTG CCTGCGCGGA GCGACGCCGC CCGTAGCGCC
GTCGCGCGGG ACGCCGACGC CGCTCTGACG GCGTTGTACT CCGAGCACTA CCGATCCCTC
GTCCGTCTCG CGGCACTGCT GCTGGATGAC ATCGGGTTGT GCGAGGAGGT CGTGCAGGAC
GCCTACATCC GGGTGCACAG TGCCTGGGGT CGGCTCCAGG ACCGGGACAA GGCCCTGGCC
TACCTCCGTC AGACGGTGGT CAATCTCGCA CGGTCCACCC TCCGGCGTCG ACTGGTCGCT
CTCAAGCACG CCCCCAAGCC GATGCCCGAC GCCGCGAGCG CCGAAGAGGG GGCCTACTCT
CTGGTCGAGC GGGCCGCCGT CGTCCAGGCA CTGCGGGAGC TGCCCAGACG GCAACGGGAA
GCGGTCGTGC TCCGCTACTA CGCGGACATG TCGGAGGCTG ACGCCGCCGC GGTGATGGGC
TGCAGCGTCG GGTCGGTGAA GGCCTACACG TCACGGGGGC TGGCGGCACT GAGCGGCAAG
CTGGAGGGCC TGCGGTGA
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| Protein sequence | MTVVEGWRPV PARSDAARSA VARDADAALT ALYSEHYRSL VRLAALLLDD IGLCEEVVQD
AYIRVHSAWG RLQDRDKALA YLRQTVVNLA RSTLRRRLVA LKHAPKPMPD AASAEEGAYS
LVERAAVVQA LRELPRRQRE AVVLRYYADM SEADAAAVMG CSVGSVKAYT SRGLAALSGK
LEGLR
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