Gene Franean1_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1036 
Symbol 
ID5669450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1215785 
End bp1216447 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID641239965 
Producthypothetical protein 
Protein accessionYP_001505398 
Protein GI158312890 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.652733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTCG TTATCGCTCG GTGCAGTGTC GACTACATCG GCCGGCTCAA GGCGCACCTG 
CCCAGCGCCG TCCGGTTGCT CCTGGTGAAG GCCGACGGCT CTGTCTCCAT CCACGCCGAC
GGACGTGCCT ACAAGCCGCT GAACTGGATG AGCCCGCCCT GCGTCATCGC CGAGGAGGAG
GGCGTCTGGC GGGTCACCAA CAAGGCCGAG GAACAGCTCG TCATCTCGAT CGAGCAGATC
CTGCACGACT CCACGCACGA GCTCGGTGTC GACCCCGGCC TGCGCAAGGA CGGCGTGGAG
GCGCACCTGC AGGTGCTGCT GGCCGACCGG CCGGACGCCG TCCGCGAGGG CCTGACGCTG
GTCCGCCGGG AGTACGAGAC CGGCATCGGC CCGGTCGACC TGCTCTGCCG CGACGCCGAC
GGCTCCACCG TGGCCGTGGA GATCAAGCGC AAGGGTGAGA TCGACGGGGT GGAGCAGCTC
ACCCGCTACC TCTCCCGCCT GGACGATGAT CCGGCCCTTC CGCATCCGGT GCGGGGCATT
CTGTGCGCCC AGTCGATCAC GCCGCAGGCA CGCCTGCTGG CCGCCGACCG CGGCATCGCC
TGCTCGGTGG TCGACTACGA CGCCCTGCGC GGCCTCGAGC CTTCCATCCC CACCCTGTTC
TGA
 
Protein sequence
MRLVIARCSV DYIGRLKAHL PSAVRLLLVK ADGSVSIHAD GRAYKPLNWM SPPCVIAEEE 
GVWRVTNKAE EQLVISIEQI LHDSTHELGV DPGLRKDGVE AHLQVLLADR PDAVREGLTL
VRREYETGIG PVDLLCRDAD GSTVAVEIKR KGEIDGVEQL TRYLSRLDDD PALPHPVRGI
LCAQSITPQA RLLAADRGIA CSVVDYDALR GLEPSIPTLF