| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1011 |
|---|
| Symbol | |
|---|
| ID | 5669425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1193479 |
|---|
| End bp | 1194483 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641239940 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_001505373 |
|---|
| Protein GI | 158312865 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGGCC CGGCCGCGTC CACGACGCGG GCCGACCACG CGGACGCCAC GCTCGCCGTC
GAGCTCGCCG CCGCGACGGC CCGGCTGGCC GCGGCCGGTG TCGCCAGCCC CCGCGGCGAC
GCCGAGCAGC TGGCGGCGCA CGTGCTCGGG GTGTCGCGCG GCCGGCTCGC GCTGGTCACC
CGGGTCGAAC CGGCCGCGGC CGGCGAGCTG CGCGCGCTGG TGGAACGGCG GGCGAGCCGG
GTCCCACTGC AGCACCTGAC CGGCCTCGCC GGCTTCCGCC ACCTGGACAT CGCCGTCGGG
CCCGGAGTGT TCATCCCCCG CCCGGAGACC GAGTGGGTGG CCGAGTGGGC GATCGCGGCC
CTGCGATCGC CCGACGCGGT CGTGGCTGGA CGTCCAATCT GTGTTGATCT TTGTGCGGGT
TCGGGGGCGA TCGCCCTGTC GGTGGCCGAC GAGGTGCCGA ACGCCGAGGT GCACGCGGTG
GAGCTGGAGC CGGCGGCGCT CGGCTGGCTG CGCCGCAACG TCGAGCGCAC GGGCCTGCCG
GTGCGGGTGC ACCAGGCCGA CGTCGGCATC CCGCGGTCGC CAACAGACGC GGGCAGGCCG
GTCGCGCCGG TCGGCACGGT CCTGACTGAC CTCGCGGGAC GGGCCGACGT CGTCATCAGC
AACCCGCCGT ATCTGCCCGA TCATGAACGG CCGAGGGTCG AGCCCGAGGT CGGCCGGCAC
GACCCGCCAG CGGCCCTGTG GGGCGGGCCC GACGGCCTGG ACGGGCCGCG CGCGGTCGTG
GCCGCCGCCG GGGGACTCTT GCGGCCAGGC GGTTTACTGG TCATGGAACA CGCGGACGGA
CATGGCCAGA CGGTGCCCGC GCTGCTCGCC GGTGAGGGCT GGTGGGCTGG TTCGTGGTCC
GAAATCGTGG ATCATCCCGA TCTCGCCGGG CGGGACCGGT TCGTCACCGC CCGCTGGAAC
CCGCCGGGGC CGCGCCCGCC GCGCGGCGCC GGAGAGGACG TGTGA
|
|---|
| Protein sequence | MTGPAASTTR ADHADATLAV ELAAATARLA AAGVASPRGD AEQLAAHVLG VSRGRLALVT
RVEPAAAGEL RALVERRASR VPLQHLTGLA GFRHLDIAVG PGVFIPRPET EWVAEWAIAA
LRSPDAVVAG RPICVDLCAG SGAIALSVAD EVPNAEVHAV ELEPAALGWL RRNVERTGLP
VRVHQADVGI PRSPTDAGRP VAPVGTVLTD LAGRADVVIS NPPYLPDHER PRVEPEVGRH
DPPAALWGGP DGLDGPRAVV AAAGGLLRPG GLLVMEHADG HGQTVPALLA GEGWWAGSWS
EIVDHPDLAG RDRFVTARWN PPGPRPPRGA GEDV
|
|---|
| |