Gene Franean1_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0998 
Symbol 
ID5669412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1178111 
End bp1178983 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content70% 
IMG OID641239926 
Productluciferase family protein 
Protein accessionYP_001505360 
Protein GI158312852 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACTTG GTGTACAGAT TCCCGACTTC ACCCGGCCCG AGGGGCCTGC CGACCTGGGC 
CGCGCGCTCG CCGAGGTCGC CCGTGAGGTC GACGAGGCCG GCTTCGACTA CCTGGCGGTG
ATGGACCACT TCTTCCAGAT CGAGATGGTC GGCCCGCCCG AGAACGACAT GCTCGAGGCC
TACACCACCC TGGGCTTCCT GGCGGCGCAC ACCCGCCGGG CGACCCTGCT GACTCTGGTG
ACCGGCACCG TCTACCGGGA GCCCGGAATT CTTGCGAAGA TCATCAGTAC CCTCGACGTG
CTTTCCGGGG GCCGGGCGAT GCTCGGAATC GGCGCGGCGT GGAACGAGCA GGAGTCCGTC
GGGCTCGGCA TCCCGTTCCC CCCGGTCGCC GAGCGCTTCG AGCGCCTCGA GGAGACCCTG
CAGATCTGTC TTCGGATGTG GTCGGACGAC GAGAGCCCCT GGACGGGCAA GCACTACCAG
CTCGCCCGGC CGCTCAACTC GCCCGCCGCG CTCACCCGGC CGCACCCGCC GATCATGATC
GGCGGGGGTG GGGAGAAGAA GACGCTGCGC CTGGTCGCGA AGTACGGGCA GGCCTGCAAC
CTCTTCTCCG GCCCTGACCT GCCGCACAAG CTCGACGTCC TGCGCCGGCA CTGCGACGCC
GAGGGCCGCG ACTACGACGA GATCGTCAAG ACCTGCTACT ACCGCTTCGA CCCGGGCAAG
TCGGGCGAGA ACGTCGGGCG CATCCTCGAC GAGCTCGGCG AACTGGCCGA GCTCGGCATC
TCGGTGGCCA TCGGCGGCGT CGCCGACATC TGGGACGTCG AGCCGCTGCG GGTCCTGGGC
GAGCGGGTCG TCCCCGCCGC CGCGGACATC TGA
 
Protein sequence
MRLGVQIPDF TRPEGPADLG RALAEVAREV DEAGFDYLAV MDHFFQIEMV GPPENDMLEA 
YTTLGFLAAH TRRATLLTLV TGTVYREPGI LAKIISTLDV LSGGRAMLGI GAAWNEQESV
GLGIPFPPVA ERFERLEETL QICLRMWSDD ESPWTGKHYQ LARPLNSPAA LTRPHPPIMI
GGGGEKKTLR LVAKYGQACN LFSGPDLPHK LDVLRRHCDA EGRDYDEIVK TCYYRFDPGK
SGENVGRILD ELGELAELGI SVAIGGVADI WDVEPLRVLG ERVVPAAADI