Gene Franean1_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0994 
Symbol 
ID5669408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1172888 
End bp1173625 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID641239922 
Productmethyltransferase type 11 
Protein accessionYP_001505356 
Protein GI158312848 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.295346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGACC TGCCGTACTC CGGCTTCGGT CTCTCCCGGT CGGTCACGCT GTTCCGCGCG 
CACCGCAAGG AGCCGGTCGA CCCGGCCGGT TTCTACTCGC TCATCGCGGC CGACTCCGTC
CGCCAGCTCC GCCGGTACAC GACGCTGTCC GGCCAGCTGG TGCTGGATGT CGGCGGCGGC
CCCGGTTACT TCCGGTCCGC GTTCCTCGAC GCGGGCGCCA GGTACTACTG GGTCGAGCCC
GACGTCTCCG AGATGGAGGC CGGTGGTCTC GATGTGCCCG GCCGGATCCG CGGGAGCGCG
CTCGAGCTGC CGTTCCGGAG CGACTCGATC GACCTCTGCT ACAGCTCGAA CGTGCTTGAG
CACGTACCCG ACCCGTGGCG GATGTGCTCG GAGCTGGTGC GGGTGACCCG CCCCGGCGGG
CTGATCTTCC TCAGCTACAC GAACTGGCTC TCGCCGTGGG GCGGGCACGA GACGGCGCCG
TGGCACTACC TCGGTGGTGA CCGCGCCGCC GACCGCTTCG AGAAGCGGCA GGGCCGCCCG
CCGAAGAACC GGTTCGGCCA GACGCTGTTC CCGGTGTCCG TCGCCGGCAC CCTCGCCTGG
GCCCGCCAGC GCTCCGACGT GGTCGTCGTC GACGCGATGC CGCGCTACCT GCCGGACTGG
GCGAAGGCCA TCCTGCGCGT CCCCGGCGCT CGTGAGGTTG TCACCTGGAA CCTCGCCATG
CTCCTGCGCA AGATCTAG
 
Protein sequence
MRDLPYSGFG LSRSVTLFRA HRKEPVDPAG FYSLIAADSV RQLRRYTTLS GQLVLDVGGG 
PGYFRSAFLD AGARYYWVEP DVSEMEAGGL DVPGRIRGSA LELPFRSDSI DLCYSSNVLE
HVPDPWRMCS ELVRVTRPGG LIFLSYTNWL SPWGGHETAP WHYLGGDRAA DRFEKRQGRP
PKNRFGQTLF PVSVAGTLAW ARQRSDVVVV DAMPRYLPDW AKAILRVPGA REVVTWNLAM
LLRKI