| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0992 |
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| Symbol | |
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| ID | 5669406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1167299 |
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| End bp | 1170769 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239920 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001505354 |
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| Protein GI | 158312846 |
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| COG category | [L] Replication, recombination and repair
[S] Function unknown |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.175331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGTCAC GGTTCTTTGC CGACACCCAC GTGCACTCCA GGTACTCGCG GGCCTGTAGC
CGCGACTGCG ACCTGGAGCA TCTGGCGTGG TGGGCGGCCC GAAAAGGCAT CCGCGTCGTC
GGGACCGGCG ACTTCACCCA TCCGGCCTGG TCGCAGGAGC TCGCGACCAA GCTGGTGCCG
GCGGAGCCGG GACTGTTCCG GCTGCGTCCC GACCTGGAGC GTGACGTGCT CGCGACGCTG
CCCGCGTCGT GCCGCACCGC GACCCGATTC ATGATCTCTA CGGAGATCTC CACCATCTAC
AAGCGAGGCG ACCGTACAAG GAAGGTTCAT CACCTCCTCT ACGCGCCCGA TCGCGAATCG
GCCGGTCGGA TCACGTCCGC ACTGGCCCGA ATCGGCAATC TCTCCGCAGA CGGACGGCCG
ATCCTCGGCC TGGACTCCCG TGACCTGCTC GAGATCACGC TCGGTGCCGG CGAGGGCTGT
TACCTGATCC CCGCGCACGT GTGGACGCCC TGGTTCGCCG TGTTGGGCTC AAAATCCGGG
TTCGACGCCG TCGAGGACTG CTACGCCGAC CTCGCCGAGC ACGTCTTCGC GCTGGAGACA
GGCCTGTCGG CGGACCCGGA GATGTTCTGG CGGATCTCCG GGCTGGACCG CTACCGGCTG
GTCAGCAACT CCGACGCGCA CTCCCCGCCG ATGCTCGGGC GGGAGGCCAC CGCCTTCACC
TGCGAGCCCG ACTACTTCTC GATCCTCAGT GCGCTGCGCA CCGGCGACGG GTTCGGTGGC
ACCGTCGAGT TCTTCCCCGA GGAGGGGAAG TACCACCACG ACGGCCACCG CAAGTGCGGG
GTGGCGCTGA CGCCGGAGCA GACCCGCGCG GTCGGCGGCA TCTGCCCCGA GTGCGGGCGT
CCGCTCACGG TAGGCGTACT CAACCGGGTG GACACGCTCG CCGACCGCAC GGAAGTGCAC
CGACCCGACA CGGCAGGTGA CGTCACGTCG CTGGTGGCCC TGCCCGAGAT CGTCGGCGAG
ATCCTCGGGG TCGGGCCGAA GAGCAAGTCG GTGGCGACGC AGGTCAGCAC CCTCGTCTCC
CGGCTCGGCC CCGAGCTCGG CATCCTCTCG GACGTCCCGC TGGACGCGAT CGCGGAGGTG
GGCTCGCCGA CGCTGGTCGA GGGCATCGGA CGGCTGCGCC GGGGCGAGGT GATCCGCCAG
GCCGGCTTCG ACGGCGAGTA CGGCGTCATC CGGCTCTTCC AGCCCGACGA GCTCACCGCC
GACGCGGGCA CGCTGTTCGA CCTCGGTACC CCCGGCCTCG CGACGGCGCC GCAGGCCGGC
ATCCGCCGGG GCCGCGGCGC CGGCCGGGGC GGCACCGCGC TCGCACCCGG CGCCGCCGAA
GCAGCCGAGG TCCCCGAGGT CCCCGAGGTC CCCGAGGTCG CCGGAGCTGC CGGAGCTACC
GACGCCGCCA AGATCACCGA AGCCGGTGAC CTGTTCCCGG GCGATGACGC GGTGGAGCGC
AGCGGCCCGC CGTCGGTGCT CGACGGACTT GATCCCGACC AGCGGCGCGC GGCCGAGCAC
GTCGGCGGGC CGCTGCTGGT CCTCGCCGGC CCCGGCACCG GGAAGACCCG CACGCTCGTG
CACGCCATCG CGCACCGGGT CCGTGAGCTC GGCGTGCCCG CCGAGCAGTG CCTGGCGGTC
ACGTTCACCC GCCGCGCTGC CGGCGAGCTG CGAGAACGGC TCGACGTTCT GCTTGCGCCA
GGCCCGGCCG GGACGCGCGC TGAGAGCACA CCCGCGGACG GCACGCCCAC AGATGCGGCG
TCCACGAGCG GTGCGCCCGT GGACGAGGCA CCAGGAGACA CGGGGAGGCC CGGTGCCGGC
GCGCTGGCGA CGACGTTCCA CGGCCTCGGC CTGCTGATCA TCCGGGAGCA GCATGTGGCG
CTCGCGCGGG CGCCACGGGT GCAGGTGGCC GACGACGCCA TCCGCGGGGA GCTGATCGAC
GAGGCGATGC ACGGGACCGA CGGTCCCGAG GCGCGGCGCC GTGCCGCGGC GGAGCTGGCC
GAGCTCAAGC GGCAGCGCGC CCTGGGGCGC ACCTACCGGG ACCACGCGCT CGCCGGGGTG
CTCGCCCGCT ACGACGCCGC ACTGCGTGAT CGCAACATGG TCGACCTCGA CGACCTGCTC
ACGCTGCCGT TGGGGCTGCT GCGGTCGAAC CCGGACCTGG CGGCCGAGTA CCAGCGGCGC
TGGCGGCACG TCTGGGTCGA CGAGTTCCAG GACATCGACG AGGTGCAGTA CGGCCTGCTG
CGCGAGCTCT GCCCGCCCGC GGCCGACCTG TGCGCGATCG GCGACCCCGA CCAGGCGATC
TACAGCTTCC GCGGCGCCGA GGTCGGCTTC TTCCTGCGCT TCGAGCAGGA CCGTCCCGGC
GCCCGGCGGG TCTCGCTCAC CCGCAACTAC CGCTCGACGC CCACCATCGT CGGCGCCGCG
CTGGACGCCA TCGCGCCCAC CACCTTCGTG CCCGGCCGCG AGCTGCGCGC GGTGACCGGC
CTGGATGAGG ACGGCCCCGT CGTCGTCCGG CAGTGCGCGA GCGAGGCCGA GGAGGCCATC
GCCGTGGCCG ACCTGATCGA GGAGGCCCTC GGCGGCACCT CGTTCCACTC CCTCGACTCG
GGCGTGGACG GCTCGGAGCG GGGCCGGCTG TCGTTCGCCG ACATCGCGGT GCTCTACCGG
ACGGCGCGCC AGGCCGAGCC GGTGATGGAC GCGCTGGTGC GCCGCGGGTT CCCGTTCCGC
CAGCATGCCC ACACCCCGCT CGCGGACGTC CCGGCCGTCG CCGCGGTGCT CGCCCTGCTG
CGCGATCGCC GTGACCCCGC GCCCCGTACG GTCACCGCGC TGCTGCGGGA CGCGGCCGCG
CGGCTCACCG ACCTCGCCGT GGCCGCCGGC ACCGAGCTCG GCACCGCTGC CGCCCTCGCG
CCCGGTGTCG CTCAGCCCGG CGGGGTCCCG GCGGGACGGC TGCCGAGCGA GGCGGAGATC
CGGCGCGCCG CGGAGCTGCT CGCCCCGGCG GCCGCGGTCG CCGGGGACGA TCTAGGCGCG
TTCCTCACCT CGGTGACCCT GGCGACGGAG GTGGACGGGC TCGACCCGCG GGCGGACCGC
ATCTCCCTGC TCACGCTGCA CGCGTCCAAG GGGCTGGAGT TCGGCCTCGT CATCATCGTC
GGCTGCGAGG ACGGCCTGCT GCCGCTGCGC TGGGGTGGGT CGAGCCCGTC GGCCGACGCC
GAGGCGGAGG AACGGCGGCT GCTCTTCGTC GGGATGACCC GGGCCCGCCG CCAGCTCGTC
CTCACCCATG CCGCCCGGCG CCGGCGCGGC GGCGACCTGG CCGACACCGG CCCGTCGGCG
TTCCTCTCCG CCATCGACGG ACGTCATCTC GACAAGCGCA CGCGCGCCGC GCAGGGCACA
GCCGCCGCCG CACGCCGTCG GTCAGCCGGC CGCCAGCTCC GCCTGATTTG A
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| Protein sequence | MRSRFFADTH VHSRYSRACS RDCDLEHLAW WAARKGIRVV GTGDFTHPAW SQELATKLVP
AEPGLFRLRP DLERDVLATL PASCRTATRF MISTEISTIY KRGDRTRKVH HLLYAPDRES
AGRITSALAR IGNLSADGRP ILGLDSRDLL EITLGAGEGC YLIPAHVWTP WFAVLGSKSG
FDAVEDCYAD LAEHVFALET GLSADPEMFW RISGLDRYRL VSNSDAHSPP MLGREATAFT
CEPDYFSILS ALRTGDGFGG TVEFFPEEGK YHHDGHRKCG VALTPEQTRA VGGICPECGR
PLTVGVLNRV DTLADRTEVH RPDTAGDVTS LVALPEIVGE ILGVGPKSKS VATQVSTLVS
RLGPELGILS DVPLDAIAEV GSPTLVEGIG RLRRGEVIRQ AGFDGEYGVI RLFQPDELTA
DAGTLFDLGT PGLATAPQAG IRRGRGAGRG GTALAPGAAE AAEVPEVPEV PEVAGAAGAT
DAAKITEAGD LFPGDDAVER SGPPSVLDGL DPDQRRAAEH VGGPLLVLAG PGTGKTRTLV
HAIAHRVREL GVPAEQCLAV TFTRRAAGEL RERLDVLLAP GPAGTRAEST PADGTPTDAA
STSGAPVDEA PGDTGRPGAG ALATTFHGLG LLIIREQHVA LARAPRVQVA DDAIRGELID
EAMHGTDGPE ARRRAAAELA ELKRQRALGR TYRDHALAGV LARYDAALRD RNMVDLDDLL
TLPLGLLRSN PDLAAEYQRR WRHVWVDEFQ DIDEVQYGLL RELCPPAADL CAIGDPDQAI
YSFRGAEVGF FLRFEQDRPG ARRVSLTRNY RSTPTIVGAA LDAIAPTTFV PGRELRAVTG
LDEDGPVVVR QCASEAEEAI AVADLIEEAL GGTSFHSLDS GVDGSERGRL SFADIAVLYR
TARQAEPVMD ALVRRGFPFR QHAHTPLADV PAVAAVLALL RDRRDPAPRT VTALLRDAAA
RLTDLAVAAG TELGTAAALA PGVAQPGGVP AGRLPSEAEI RRAAELLAPA AAVAGDDLGA
FLTSVTLATE VDGLDPRADR ISLLTLHASK GLEFGLVIIV GCEDGLLPLR WGGSSPSADA
EAEERRLLFV GMTRARRQLV LTHAARRRRG GDLADTGPSA FLSAIDGRHL DKRTRAAQGT
AAAARRRSAG RQLRLI
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