Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0978 |
Symbol | |
ID | 5669392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1142214 |
End bp | 1142531 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239906 |
Product | putative phage repressor |
Protein accession | YP_001505340 |
Protein GI | 158312832 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR02754] nickel-type superoxide dismutase maturation protease |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.368778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGCGG TCGCTGTCCG CGGCGAGTCG ATGCAACCAA CCCTGAACGA CGGCGACACA TGCCTCGTGC TGTGGGGCGC GTCACCCAGA CCGGGTGACG TCGTGGTGGC GCGGCTGCCC GAGCGCGGGC TGGGGGTCAA ACGGGCCGAG TTCACCGACC CGGACGGATC CTGGTGGCTG CGCTCGGACA ACGTGCGCGC CGGCACCGAC AGCGCGACGT TCGGGATGGT CCCGGCCGGC GACGTCCTCG GCCGGGTCGT GGCGCGGTAC TGGCCGCGCC CGCGTGCACT GCGCCGCAGC CGGCCACCCT GGGCGTGA
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Protein sequence | MRAVAVRGES MQPTLNDGDT CLVLWGASPR PGDVVVARLP ERGLGVKRAE FTDPDGSWWL RSDNVRAGTD SATFGMVPAG DVLGRVVARY WPRPRALRRS RPPWA
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