Gene Franean1_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0978 
Symbol 
ID5669392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1142214 
End bp1142531 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content75% 
IMG OID641239906 
Productputative phage repressor 
Protein accessionYP_001505340 
Protein GI158312832 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02754] nickel-type superoxide dismutase maturation protease 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.368778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGCGG TCGCTGTCCG CGGCGAGTCG ATGCAACCAA CCCTGAACGA CGGCGACACA 
TGCCTCGTGC TGTGGGGCGC GTCACCCAGA CCGGGTGACG TCGTGGTGGC GCGGCTGCCC
GAGCGCGGGC TGGGGGTCAA ACGGGCCGAG TTCACCGACC CGGACGGATC CTGGTGGCTG
CGCTCGGACA ACGTGCGCGC CGGCACCGAC AGCGCGACGT TCGGGATGGT CCCGGCCGGC
GACGTCCTCG GCCGGGTCGT GGCGCGGTAC TGGCCGCGCC CGCGTGCACT GCGCCGCAGC
CGGCCACCCT GGGCGTGA
 
Protein sequence
MRAVAVRGES MQPTLNDGDT CLVLWGASPR PGDVVVARLP ERGLGVKRAE FTDPDGSWWL 
RSDNVRAGTD SATFGMVPAG DVLGRVVARY WPRPRALRRS RPPWA