| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0963 |
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| Symbol | |
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| ID | 5669377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1126323 |
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| End bp | 1127315 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239891 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001505325 |
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| Protein GI | 158312817 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.409004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.187686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTATCC TCGTCACCGG CGCGGCCGGT TTCATCGGTT CCACCGTCGT CGATCGGATG
CTTGCTGACG GTCATTCGGT CGTGGGCATC GACGACCTGT CGTCCGGGCG CATGGAGAAT
CTCACGCAGG CGGCGACCGA TGCCCGGTTC TCGTTCGAGA AGGGCGATAT CACGTCGCCC
GATCTCGGTG ACTTCGTCGC CCGGGTCCGC CCCGACGCGG TGGCTCATCT CGCGGCGCAG
ATCGACGTCC GGATCAGCGT CGCCGACCCG CTGCTCGACG CCCGGCTGAA CGTTCTCGGC
ACGATCAACG TGCTGGAGGC GGCCCGGGCC GCCGGGGTGG TGAAGGTCAT CCACACCTCG
TCCGGCGGGT CGATCTACGG CACGCCGGCC GCGCTGCCCG TCGACGAGTC CGTGCCACCC
GCGCCCGAGT CACCGTACGC GGCCGGGAAG GCCGCCGGCG AACTGTACCT CAACGTGTAC
CGGGTGACCT ACGGTGTCGC GACGACGGCG CTGGCGCTCG GGAACGTCTA CGGGCCCCGC
CAGGACCCGC ACGGCGAGGC CGGGGTGGTC GCCATCTTCG GCACCGCCCT GCTCGAGGGG
CGCCCGACCA AGATCTTCGG TGACGGCGCG ACCAGCCGGG ACTACGTCTT CGTCGGGGAC
GTCGCCGACG CCTTCGCCCG GTGCGTGCCG GCCCAGGCGG CCAACGGCCT GCGGATCAAC
ATCGGGACCG GCGCCGAGAC CACCGTTCTC GACCTGCACA GCCGCATCGC GCGGGTGGTC
GGGGTGCCGG ACGAGCCCCA GTTCGCCCCG CCGCGCCCCG GCGAGCTGCA GCGCATCAGC
CTGGACGTCG GCCTCGCGGA GCGGGAGATC GGCTGGCGGC CGCGGATGGA CCTGGACGGC
GGGCTCACCC GGACCGTCGA CTGGATCCGG GCCCGGATCG GCGCCCGCGC CGCCGCCTCC
GGCTCGGCCG GCGCGACCGG CGCGACCGGC TGA
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| Protein sequence | MRILVTGAAG FIGSTVVDRM LADGHSVVGI DDLSSGRMEN LTQAATDARF SFEKGDITSP
DLGDFVARVR PDAVAHLAAQ IDVRISVADP LLDARLNVLG TINVLEAARA AGVVKVIHTS
SGGSIYGTPA ALPVDESVPP APESPYAAGK AAGELYLNVY RVTYGVATTA LALGNVYGPR
QDPHGEAGVV AIFGTALLEG RPTKIFGDGA TSRDYVFVGD VADAFARCVP AQAANGLRIN
IGTGAETTVL DLHSRIARVV GVPDEPQFAP PRPGELQRIS LDVGLAEREI GWRPRMDLDG
GLTRTVDWIR ARIGARAAAS GSAGATGATG
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