| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0961 |
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| Symbol | |
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| ID | 5669375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1125172 |
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| End bp | 1125984 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239889 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_001505323 |
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| Protein GI | 158312815 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.443199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.100351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCC AGCACAGCAC ACCAGGCCCG CGCTCGCAGG ATCGCCGGGT GACGGGGCCG
GGCCGCGGGC GGCCGGTCGC CGCGCCGGTG CGCACCAGGG CGGTGGCGGG GGTATCGTCC
GGCGCGGAGA GCGGTCCAGT CAGGACGGCA GCCGGCGGGC CGGCGATCGG TTCCCGGCGG
GGCGAAGGAG TGATCCTGGT CGACGAGACC AATGACGAGT CCACCCAGGA GCGCGGCGCC
CGGTTCGAGC GGGATGCCCT GCCGTTCCTC GACCAGCTCT ACGCTGCCGC GCTGCGGATG
ACCCGCAACC CCGCGGACGC GGAGGATCTC GTTCAGGAGA CCTTCGTCAA GGCATTCGCG
GCCTTCCACC AGTTCCAGGA GGGAACCAAC CTCAAGGCCT GGTTGTACCG CATCCTGACG
AACACGTTCA TCAACACGTA CCGCAAGCGC CAGCGGCAGC CGCTGCAGAG CCCGACCGAG
CAGGTCGAGG ACTGGCAGCT CGCCGAGGCG GAGTCGCACA CGTCCACCGG CCTGAAGAGC
GCCGAGGCCG AGGCGTTGGA GCACCTGCCC GACAGCGACA TCACCGAGGC GCTCCAGGCG
CTGCCCGAGG ACTTCCGGAT GGCGGTCTAT CTGGCCGACG TCGAGGGGTT CTCGTACAAG
GAGATCGCTG AGATCATGGG CACTCCCATC GGTACCGTGA TGTCACGGCT GCACCGTGGG
CGGCGTGGTC TGCGAAAGTC GCTGGAGCAG TACGCGCTGG AGCGCGGGCT GGTTCCGGCC
GGGTCTGCCG AGAACGAGGG CGGTGGGTCG TGA
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| Protein sequence | MTFQHSTPGP RSQDRRVTGP GRGRPVAAPV RTRAVAGVSS GAESGPVRTA AGGPAIGSRR
GEGVILVDET NDESTQERGA RFERDALPFL DQLYAAALRM TRNPADAEDL VQETFVKAFA
AFHQFQEGTN LKAWLYRILT NTFINTYRKR QRQPLQSPTE QVEDWQLAEA ESHTSTGLKS
AEAEALEHLP DSDITEALQA LPEDFRMAVY LADVEGFSYK EIAEIMGTPI GTVMSRLHRG
RRGLRKSLEQ YALERGLVPA GSAENEGGGS
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