Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0960 |
Symbol | |
ID | 5669374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1124106 |
End bp | 1124960 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641239888 |
Product | hypothetical protein |
Protein accession | YP_001505322 |
Protein GI | 158312814 |
COG category | [R] General function prediction only |
COG ID | [COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.796959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0488805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGGCA CGTCACATGC GCAAGGTGAA ATTCTGACAG ATGTTCGGGC CGACCACGCA GTGTCCTTCC CGGGCGGCTC GGACGGAAGT GACCTGGCCG AGTCGCCGGC GCCGGTCAGG GCGGCCGCGA CGGCAGACGA GGATCCCCTC CTTGTGGACG GTGGACGACT GCGGGTGGTT CCCGTCCCGC CACGCGCCGA GGTTGTCGGC ACCGTCGTCC TCCTGCACGG GGCGGGCAGC GGCACCGACA CGCCGGCGCT GACCGCGCTC GCGGAACGCC TCACCGCCGC CGGGATCCGG GTGGCCGCCC TGGAGATGCC CTACCGGGTG GCCGGCCGGC GCGCCCCGGA CCGCCCCGCC CGGCTGGACG CCGTGCTCAC CGCGGCGGTC GCCGCGCTGG GCCCGCCCGA CCGCCTGGTG CTGGCCGGGG CATCGATGGG ATCGCGGGTG GCGGTGCGCT GCGCCCGTGC CGTCGGTGCC CGCGCGGTGC TGGCGCTGGG CTTTCCGCTC GAGCCGCCGG GCGGGAAGCC GTCGCGCGGG CCGGAGCTGG CGGGGGCCGG CGTCCCCGTC CTCGTGGTGC AGGGATCGCG CGACGCCTTC GGCATGCCGG TGGCCGACCC GTCTTGCGGG ATCAGGGTGC ACGTCGTGGC GGGGGCCGAC CACTCGTTCC GGGTGCGGGT CCGGGACGGC CGGCCCGTGG GGGAGGTGAT CGGGGAGGCC GCGGAGGTGG GCGCGTCCTG GCTGCTCGCC CGCCTCGGGG ACGAGCCCTC CGGCACGGTT GGGCACGAAC TCGGGGACAC GGTCGGACAT GAGCCCGGAG GCATGGCCGG AGACGGGCCC GGCGGCACGG CCTGA
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Protein sequence | MRGTSHAQGE ILTDVRADHA VSFPGGSDGS DLAESPAPVR AAATADEDPL LVDGGRLRVV PVPPRAEVVG TVVLLHGAGS GTDTPALTAL AERLTAAGIR VAALEMPYRV AGRRAPDRPA RLDAVLTAAV AALGPPDRLV LAGASMGSRV AVRCARAVGA RAVLALGFPL EPPGGKPSRG PELAGAGVPV LVVQGSRDAF GMPVADPSCG IRVHVVAGAD HSFRVRVRDG RPVGEVIGEA AEVGASWLLA RLGDEPSGTV GHELGDTVGH EPGGMAGDGP GGTA
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