Gene Franean1_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0960 
Symbol 
ID5669374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1124106 
End bp1124960 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content77% 
IMG OID641239888 
Producthypothetical protein 
Protein accessionYP_001505322 
Protein GI158312814 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.796959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0488805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGCA CGTCACATGC GCAAGGTGAA ATTCTGACAG ATGTTCGGGC CGACCACGCA 
GTGTCCTTCC CGGGCGGCTC GGACGGAAGT GACCTGGCCG AGTCGCCGGC GCCGGTCAGG
GCGGCCGCGA CGGCAGACGA GGATCCCCTC CTTGTGGACG GTGGACGACT GCGGGTGGTT
CCCGTCCCGC CACGCGCCGA GGTTGTCGGC ACCGTCGTCC TCCTGCACGG GGCGGGCAGC
GGCACCGACA CGCCGGCGCT GACCGCGCTC GCGGAACGCC TCACCGCCGC CGGGATCCGG
GTGGCCGCCC TGGAGATGCC CTACCGGGTG GCCGGCCGGC GCGCCCCGGA CCGCCCCGCC
CGGCTGGACG CCGTGCTCAC CGCGGCGGTC GCCGCGCTGG GCCCGCCCGA CCGCCTGGTG
CTGGCCGGGG CATCGATGGG ATCGCGGGTG GCGGTGCGCT GCGCCCGTGC CGTCGGTGCC
CGCGCGGTGC TGGCGCTGGG CTTTCCGCTC GAGCCGCCGG GCGGGAAGCC GTCGCGCGGG
CCGGAGCTGG CGGGGGCCGG CGTCCCCGTC CTCGTGGTGC AGGGATCGCG CGACGCCTTC
GGCATGCCGG TGGCCGACCC GTCTTGCGGG ATCAGGGTGC ACGTCGTGGC GGGGGCCGAC
CACTCGTTCC GGGTGCGGGT CCGGGACGGC CGGCCCGTGG GGGAGGTGAT CGGGGAGGCC
GCGGAGGTGG GCGCGTCCTG GCTGCTCGCC CGCCTCGGGG ACGAGCCCTC CGGCACGGTT
GGGCACGAAC TCGGGGACAC GGTCGGACAT GAGCCCGGAG GCATGGCCGG AGACGGGCCC
GGCGGCACGG CCTGA
 
Protein sequence
MRGTSHAQGE ILTDVRADHA VSFPGGSDGS DLAESPAPVR AAATADEDPL LVDGGRLRVV 
PVPPRAEVVG TVVLLHGAGS GTDTPALTAL AERLTAAGIR VAALEMPYRV AGRRAPDRPA
RLDAVLTAAV AALGPPDRLV LAGASMGSRV AVRCARAVGA RAVLALGFPL EPPGGKPSRG
PELAGAGVPV LVVQGSRDAF GMPVADPSCG IRVHVVAGAD HSFRVRVRDG RPVGEVIGEA
AEVGASWLLA RLGDEPSGTV GHELGDTVGH EPGGMAGDGP GGTA