Gene Franean1_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0956 
Symbol 
ID5669370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1119956 
End bp1120612 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID641239884 
ProductTetR family transcriptional regulator 
Protein accessionYP_001505318 
Protein GI158312810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0905948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGGC GCCGACGCCG GCAGCCGGTG GAGGCCGAGC GCGAGATCCT CCAGGCCGCG 
ATCGAGATGA TCGGCTCGGA CGAACCCGGC CCGATGACCG TCGCGGCGCT GATGAGCCGC
ACCGGGCTCG GCCGCTCCGC CTTCTACGCG TACTTCCGGG ACGTCCCCGA CCTGCTGCGG
CGGCTGCTGC GTGAGATCGA GGGCGAGCTG TCGGCGGCGT CCGCCGGCTG GTTCGACGGC
AACGGCGACC CGGTCGAGGA CTGCGTCCGC TCCGCCCGGA CCATCGTCGG CGTGCACCTG
CGCCACGGGT TCGTCCTGCG GGTCATCGCG CAGGCCGCGG CCACCGATCC GGAGCTGGCC
GCCGGGTACC GGAGGGCGGC GGTCGAGGGA TTTGTCACAG CGGTGACCGA GCGGCTCGGC
CGGGAGCAGG CCCGCGGCCG GGTGCGCCCC GACCACCACC CACAGAGCGC GCGGGCGTTG
ATGGCGATGA CCGATGCTTA CCTGCGCGAA ACACTGGGCC ACCACCCCCG GGCGGATCCC
GCCGAGGTCA TCCGTACCCT CACCGTGGTC TGGTCGCAGG CGCTCTACGG GCGGGCACCG
GCAGAGCCTG CCGAAGCCGC CACGCCGGGC GGGCGGATCC GGGCCGACGT CCGGTGA
 
Protein sequence
MARRRRRQPV EAEREILQAA IEMIGSDEPG PMTVAALMSR TGLGRSAFYA YFRDVPDLLR 
RLLREIEGEL SAASAGWFDG NGDPVEDCVR SARTIVGVHL RHGFVLRVIA QAAATDPELA
AGYRRAAVEG FVTAVTERLG REQARGRVRP DHHPQSARAL MAMTDAYLRE TLGHHPRADP
AEVIRTLTVV WSQALYGRAP AEPAEAATPG GRIRADVR