Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0956 |
Symbol | |
ID | 5669370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1119956 |
End bp | 1120612 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239884 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001505318 |
Protein GI | 158312810 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0905948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGGC GCCGACGCCG GCAGCCGGTG GAGGCCGAGC GCGAGATCCT CCAGGCCGCG ATCGAGATGA TCGGCTCGGA CGAACCCGGC CCGATGACCG TCGCGGCGCT GATGAGCCGC ACCGGGCTCG GCCGCTCCGC CTTCTACGCG TACTTCCGGG ACGTCCCCGA CCTGCTGCGG CGGCTGCTGC GTGAGATCGA GGGCGAGCTG TCGGCGGCGT CCGCCGGCTG GTTCGACGGC AACGGCGACC CGGTCGAGGA CTGCGTCCGC TCCGCCCGGA CCATCGTCGG CGTGCACCTG CGCCACGGGT TCGTCCTGCG GGTCATCGCG CAGGCCGCGG CCACCGATCC GGAGCTGGCC GCCGGGTACC GGAGGGCGGC GGTCGAGGGA TTTGTCACAG CGGTGACCGA GCGGCTCGGC CGGGAGCAGG CCCGCGGCCG GGTGCGCCCC GACCACCACC CACAGAGCGC GCGGGCGTTG ATGGCGATGA CCGATGCTTA CCTGCGCGAA ACACTGGGCC ACCACCCCCG GGCGGATCCC GCCGAGGTCA TCCGTACCCT CACCGTGGTC TGGTCGCAGG CGCTCTACGG GCGGGCACCG GCAGAGCCTG CCGAAGCCGC CACGCCGGGC GGGCGGATCC GGGCCGACGT CCGGTGA
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Protein sequence | MARRRRRQPV EAEREILQAA IEMIGSDEPG PMTVAALMSR TGLGRSAFYA YFRDVPDLLR RLLREIEGEL SAASAGWFDG NGDPVEDCVR SARTIVGVHL RHGFVLRVIA QAAATDPELA AGYRRAAVEG FVTAVTERLG REQARGRVRP DHHPQSARAL MAMTDAYLRE TLGHHPRADP AEVIRTLTVV WSQALYGRAP AEPAEAATPG GRIRADVR
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