| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0943 |
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| Symbol | |
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| ID | 5669357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1103070 |
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| End bp | 1104116 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239870 |
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| Product | peptidase S16 lon domain-containing protein |
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| Protein accession | YP_001505305 |
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| Protein GI | 158312797 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.652733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGCC GCGCGCAGAC ACTCTTCGTT GCGTCGGTGC TGACGCTGAT CCTCGCCGTC
GCGGGCCTGT GGCTGCCGGT GCCCTTTGTG ACCTTTGCGC CCGGTCCGGT TACCGACACT
CTCGGTAAGG TCGACGGGGC GCCGCTGATC GAGATCGACG GCCGCAAGAC CTACCCGACG
GCCGGCAGCC TCGAGCTGAC CACCGTCGAG GAGACGCCCC GGCTGAACCT GCTCGGCGCC
CTGCAGGACT GGTTCGCCTC CGACCGGGCT GTTGTGCCCA GCGAGCTGGT CCGTCCGCCG
GGCTCCAGCC AGGAGCAGAT CCGGCAGGAG AACACCCAGG CGATGATCGA CTCCCAGGAC
CAGGCGACCG CGGCCGCGTT GAGCGAGCTC GGCATCGCCC CGACCGGGGC AGAGGTCGTC
GTACACGAGG TGCTGTCCGA CTCGCCGGCC CAGGGCCTGC TGCGCGCCGG TGACGTCATC
ACCTCCGTCG GCGGCGTCGC CATCACCGGT CAGGACGGCC TGCGGGAGCA GATCGGCCGG
GTGAAGCCCG GTGAGGTGGT CGAGGTCGCC TACCGGCGGG ACGGCACCGC CGGCACCGGG
CGGATCACCA CCAGGCCGGC GACGGACGAT CCGACGCGGC CGATGATCGG GGTGACGACG
ACGGAGAAAC GGTCGTACCC GTTTACCGTC CGTATTCGGA TTTCCGACAT CGGCGGGCCC
AGCGCCGGCC TGATGTTCGC GCTGGGCATC GTCGACCTGC TCACCCCCGG CGAGCTGACC
GGCGGGAAGA CGGTCGCCGG CACCGGGACC ATCGACGCCG CTGGCGAGGT GGGCCCCATC
GGGGGCATCC AGCAGAAGAT CCTCGGCGCG CAGCGGGCCG GCGCCTCGGT CTTCCTGGTC
CCGAAGGGCA ACTGCGCGGA CGCCGTCCGG ATGAACACCG ACCTGCGGCT TGTCCAGGTG
ACGAACCTGT CGGGAGCCCT GGACGCGCTC AACACCCTGC GGGCCAAGCC CGACGCCACC
AACGTGCCCA CCTGCTCCGC GGCGTAG
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| Protein sequence | MGRRAQTLFV ASVLTLILAV AGLWLPVPFV TFAPGPVTDT LGKVDGAPLI EIDGRKTYPT
AGSLELTTVE ETPRLNLLGA LQDWFASDRA VVPSELVRPP GSSQEQIRQE NTQAMIDSQD
QATAAALSEL GIAPTGAEVV VHEVLSDSPA QGLLRAGDVI TSVGGVAITG QDGLREQIGR
VKPGEVVEVA YRRDGTAGTG RITTRPATDD PTRPMIGVTT TEKRSYPFTV RIRISDIGGP
SAGLMFALGI VDLLTPGELT GGKTVAGTGT IDAAGEVGPI GGIQQKILGA QRAGASVFLV
PKGNCADAVR MNTDLRLVQV TNLSGALDAL NTLRAKPDAT NVPTCSAA
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