| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0938 |
|---|
| Symbol | |
|---|
| ID | 5669352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1097189 |
|---|
| End bp | 1098820 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641239865 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505300 |
|---|
| Protein GI | 158312792 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0169298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.687676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGACA TCCCACGGCG AGCGGTCGTC CGCACCGCCA AGCTCGCGAC CCTCCCGATC
GGCATCGCCG GCCGGGCGAC ACTCGGCGTC GGAAAGCGCC TCGGCGGCAG GCCCGCCGAG
GCCGTCGCGA CCGAGCTGCA GCAGCGCACC GCGGCGCAGA TCTTCCGGGT GCTCGGCGAG
CTCAAGGGCG GGGCCATGAA GCTCGGGCAG GCGCTGTCCG TCTTCGAGGC CGCGCTGCCC
GACGAGGTCG CCGGCCCCTA CCGCGCCGCG CTGACGAAAC TGCAGGAGGC GGCGCCACCG
CTGCCCGCCG CCACGGTGCA CAAGGTCCTC GCCGAGGAGC TCGGCCCCGA ATGGCGGGCC
CTGTTCGCCA GCTTCGACGA CACACCCGCC GCCGCCGCGA GCATCGGCCA GGTGCACCGC
GCCGTGTGGG CGGACGGCCG GCCCGTCGCG GTGAAGATCC AGTACCCGGG GGCGGGCTCG
GCCCTGCTGG CTGATCTGAA CCAGCTGGGC CGCGCCGCGC GGCTGTTCGG CGCGCTGACG
CCCGGTCTCG ACATCAAGCC GCTGGTCGCC GAGCTCAAGG CACGCATCAC CGAGGAGCTC
GACTACCGGC TCGAGGCCGC CTGGCAGCGG GCGTTCGCGC AGGCCTACGC CGACGACCCG
GACATCGTCG TCCCCCGGCC GATCGCCGGG GCGGACCGGG TCCTGGTCAG CGAGTGGATC
GACGGGGTGC CGCTGTCGAC CATCATCGAC CGGGGGACGC AGGAGGAGCG GGACCGCGCC
GGCCTGCTCT TGGTCCGCTT CCTCTACTCC TGCCCCGGCC GGGCCGGGCT GCTCCACGCC
GACCCGCACC CGGGCAACTT CCGGCTCCTC GCGGACGGCC GGCTCGGTGT TCTCGACTTC
GGGGCGGTGA ACCGTCTGCC CGGCGGGCTG CCCGAGCCGA TCGGCCGGCT CGCCCGGCTG
ACCCTCGCCG GTGACGCCGA GGCCGTCGCC GAAGGGCTGC GGGCGGAGGG GTTCATCCCG
GAGGGCGCCG CCATCCCCGC GGAGGACCTG CTCGACTACC TGGCACCGAT GCTCGCGCCG
ATCACCGACG AGGAGTTCAC CTTCTCCCGC GACTGGCTGC GCGGGGAGGC GCTCCGCCTC
GGTGACTGGC GCTCCGCCGC GGCGCAGCTC GGCCGCCAGC TCAACCTGCC ACCGTCCTAC
CTGCTGATCC ACCGGGTGAC GCTCGGCGCG ATCGGGATCC TCTGCCAGCT CGGCAGCTCC
GGCCCGTTCC GGGCCGAGAT GGAGCGCTGG CAGCCCGGGT TCGCCCCGCC GCGCAGCGCC
GCCGCACGCC ACGCGGCAGC CGCGAACCGG CCGAACCGCC GCCTTCCCAG ACTCGACATC
GAGGACGGCA CCGGCGTCAT CCGTCCGCTC CCCGGACCGG TGGTCCTCGC CACCGCCCCC
GCGCAGCGCT CGGGGCGCTC GGGCCGCGCA CGCAGCCGCG TCCGCCCGCC GGAGCAGGCC
AGCACGCCGG AGCAGGCTGG TCCACCGGAG ACCAGCCGAC CGTCGCGGCA GGCCCGGCCA
GCTCCAGGAA ACCGACGCAA GCTCGAGAAA GAGGCCCAGC CCGAACCAGG GACCCAGCCC
GAACCCCGCT GA
|
|---|
| Protein sequence | MSDIPRRAVV RTAKLATLPI GIAGRATLGV GKRLGGRPAE AVATELQQRT AAQIFRVLGE
LKGGAMKLGQ ALSVFEAALP DEVAGPYRAA LTKLQEAAPP LPAATVHKVL AEELGPEWRA
LFASFDDTPA AAASIGQVHR AVWADGRPVA VKIQYPGAGS ALLADLNQLG RAARLFGALT
PGLDIKPLVA ELKARITEEL DYRLEAAWQR AFAQAYADDP DIVVPRPIAG ADRVLVSEWI
DGVPLSTIID RGTQEERDRA GLLLVRFLYS CPGRAGLLHA DPHPGNFRLL ADGRLGVLDF
GAVNRLPGGL PEPIGRLARL TLAGDAEAVA EGLRAEGFIP EGAAIPAEDL LDYLAPMLAP
ITDEEFTFSR DWLRGEALRL GDWRSAAAQL GRQLNLPPSY LLIHRVTLGA IGILCQLGSS
GPFRAEMERW QPGFAPPRSA AARHAAAANR PNRRLPRLDI EDGTGVIRPL PGPVVLATAP
AQRSGRSGRA RSRVRPPEQA STPEQAGPPE TSRPSRQARP APGNRRKLEK EAQPEPGTQP
EPR
|
|---|
| |