| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0916 |
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| Symbol | |
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| ID | 5669330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1066963 |
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| End bp | 1068978 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239843 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001505278 |
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| Protein GI | 158312770 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0853384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.398163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGAGA ACGTTGCAAT ATCACACCCG CTCGGGGCGA GACACGGGTT ATCCTGGGCC
CAGCCGGTGG TCATCACACC ACCCAGCCAT CAGGCCGCTG ATCGACTGGC GCCGCCCCGA
CACCGGGCCG CAGGCGCCGC GCGGCACATC GCGAGCGGGT TCAGCGTAGG ACACCGCTCA
GAGCAGACCA GGAGCGTCCC GCTGTCCGTC ACAAGCACAC AAACGCCCAA CAACGAACCC
ATCAGCGACG GCTCTGACAC CACGAGCCCG GCCGAGACTC CGAGTCTGGC CGACACCCCG
AGTCTGGCCC CCACCTTCGC CGAGATCGGC GTGCGGGCCG AGACAGTCGC CGCCCTGGCG
GAGGTCGGCA TCATCCGGCC GTTCGCCATC CAGGAGCTCA CCCTCCCCCT CGCCCTCGAG
CGCACCGACA TCATCGGGCA GGCGCGGACG GGTACCGGCA AGACCCTCGC CTTCGGCATC
CCCATCGTCC AGGTCGTCAC GGCGCCGGAC GAGGGCGCGG ACGGCCGCCC GCAGGCGCTC
GTCGTCGTCC CCACCCGTGA GCTGTGCGTG CAGGTCACCG CGGACATCGC CCGCGCCGGC
CTCGGCCGCG GGCTGCGCGT GCTGTCGGTG TACGGCGGCC GCGCCTACGA ACCCCAGCTC
AGCGCGCTGC GCGCCGGCGT CGACATCGTC GTCGGCACGC CCGGGCGCCT GCTCGACCTC
GCCCGTCAGA AGGCACTCGA CCTCGCGGGC GTGCGCGCCC TCGTGCTCGA CGAGGCAGAC
GAGATGCTCG ACCTCGGCTT CCTGCCCGAC GTCGAGCGCA TCCTCGCGTT CCTGCCGGAG
CAGCGGCACA CGATGCTGTT CTCCGCGACG ATGCCCGGGC CCGTCATCTC GCTCGCCCGC
AGGTTCATGA CCCGTCCGGT GCACGTCCGC GCGGAGCAGC CCGACGAGGG CCGCACCGTC
CCGAACACGC AGCAGCACGT CTTCCGTGCG CACGCGCTGG ACAAGATGGA GGTGCTCGCG
CGCGTCCTGC AGGCGGAGAG CCGCGGGCTG GCGATGGTGT TCGTCCGCAC CCGGCGCACC
GCCGACAAGG TCGCCGAGGA CCTGGCCCGC CGTGGCTTCG CCGCGGCGCC GGTGCACGGC
GACCTCGGCC AGGGCCAGCG TGAGCAGGCG CTGCGCGCGT TCCGCGCCGG CAAGGTGGAC
GTCCTCGTCG CCACCGATGT CGCTGCGCGC GGCATCGACG TCGGCGGCGT CACCCACGTC
GTGAACTATC AGTGCCCCGA GGACGAGCAC GCCTACCTGC ACCGAATCGG CCGTACCGGC
CGGGCCGGCG GCAGCGGTGT CGCGGTCACC TTCGTCGACT GGGACGACCT GCCCCGGTGG
ACGCTGGTCA ACCGGGCGCT GGCGCTCCCG TTCGAGGAGC CGCTGGAGAC CTACTCCACC
TCGGAGCACC TGTTCGAGCT GCTGGCCATC CCGGCCGGGG TGAAGGGCAC ACTGCCGCAC
TCGGCGCGGA CCCGGGCCGG CCTGGCCGCC GAGGAGATCG AGGACCTCGG CGAGAAGGGC
CGCGGCGCCC GCCGCCGCAC CCGCGAGCGG GAGGACGAGC GTCCCGCCCG CCCGGCCCGT
GCCCGGGTCC GGCAGCGCAC CCGGGGTGCC GGGGCGGCCG CGGCTGCCAC CGGCCTCACC
GTCGCCGACG GCTCGCAGGC CGACGGCCCA GCGCTCGACG GCCCGGCGCT CGACGGTCAG
GCCGGCCTCG ACAACGGCCT CACCGGCACC GTGGACGTGC CCGTCGCGCC GGTCCGCGCC
ATCAGTGGCG ACACGGCCCG CGCCGACGCC GTCCTGAGCG AGTCCGGCGA GGACGCCGCC
ACCGACCCGA CGGCCGAGCC CGCCCGACGC CGGCGGCGTA GGCGCGGCGG CCGGGGGCGC
GGCACGGGCA CCGTGCGCGA CACCGACGTG GAGTCGATGG ACGACGACAC GGCCGGTCCC
GGCGCCGACC ACACTCCCCA GGCCGAGTCG GCCTGA
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| Protein sequence | MGENVAISHP LGARHGLSWA QPVVITPPSH QAADRLAPPR HRAAGAARHI ASGFSVGHRS
EQTRSVPLSV TSTQTPNNEP ISDGSDTTSP AETPSLADTP SLAPTFAEIG VRAETVAALA
EVGIIRPFAI QELTLPLALE RTDIIGQART GTGKTLAFGI PIVQVVTAPD EGADGRPQAL
VVVPTRELCV QVTADIARAG LGRGLRVLSV YGGRAYEPQL SALRAGVDIV VGTPGRLLDL
ARQKALDLAG VRALVLDEAD EMLDLGFLPD VERILAFLPE QRHTMLFSAT MPGPVISLAR
RFMTRPVHVR AEQPDEGRTV PNTQQHVFRA HALDKMEVLA RVLQAESRGL AMVFVRTRRT
ADKVAEDLAR RGFAAAPVHG DLGQGQREQA LRAFRAGKVD VLVATDVAAR GIDVGGVTHV
VNYQCPEDEH AYLHRIGRTG RAGGSGVAVT FVDWDDLPRW TLVNRALALP FEEPLETYST
SEHLFELLAI PAGVKGTLPH SARTRAGLAA EEIEDLGEKG RGARRRTRER EDERPARPAR
ARVRQRTRGA GAAAAATGLT VADGSQADGP ALDGPALDGQ AGLDNGLTGT VDVPVAPVRA
ISGDTARADA VLSESGEDAA TDPTAEPARR RRRRRGGRGR GTGTVRDTDV ESMDDDTAGP
GADHTPQAES A
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