Gene Franean1_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0912 
Symbol 
ID5669326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1062354 
End bp1062785 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content74% 
IMG OID641239839 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_001505274 
Protein GI158312766 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.563989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.186238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG TGAAGATCAA TGTCCTCACG GTCCCCCCGG CGATGCGGGA GACCCTGGAG 
TCGCGGTTCG CCGGGCGGGC CGGGATGGTC GAGAAGGCGG ACGGGTTCGA GTGGTTCGAG
CTCCTGCGCC CGCTCGAGGG AACCGACACC TACCTCGTCT ACACCCGGTG GCGCAGCGAG
GAGGACTTCC AGAAGTGGCA GTCCTCGATG GCGTTCAGTG AGGGCCACCG GGCGGCCGGC
GTGGAGGCGT CGTCCGGCCA GGGCCACCCC GGCGGCCACC CCGGCGGTTC GGGCGCCGCT
CCCGCCGGCC ATGGTGCTCC CGCCGGCCAT GGCGCCCCGG GTGGGCACGG TGCTCCGGGT
GGGCCGGCCG CGTCCGGCGC CACGCTCTGG TCGTTCGAGG TCATCCAGAC CGCCGCGCCG
GCTGCCGGCT GA
 
Protein sequence
MSVVKINVLT VPPAMRETLE SRFAGRAGMV EKADGFEWFE LLRPLEGTDT YLVYTRWRSE 
EDFQKWQSSM AFSEGHRAAG VEASSGQGHP GGHPGGSGAA PAGHGAPAGH GAPGGHGAPG
GPAASGATLW SFEVIQTAAP AAG