| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0910 |
|---|
| Symbol | |
|---|
| ID | 5669324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1060102 |
|---|
| End bp | 1061367 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641239837 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_001505272 |
|---|
| Protein GI | 158312764 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.111037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGTGG CCGAGGAGAC GACAGACCAG CCGCCGTGGG TGGGCCGCGA GCGGGACGTG
ACCGCCGGGG CGTCCGGCCC GGCGATGCGG ATCTCGGGGA GGGCGCAGAC CTTCACCGAG
TCCGTGATCC GGGACATGAC CAGGCTCGCG CTGCGGCACG GGGCGGTGAA CCTGGCGCAG
GGCTTCCCGG ACTTCGCCTG CCCGACCGAG CTGAAGGAAG CCGCGAAGGC GGCCATCGAC
GCCGACGTCA ACCAGTACGC GATCACCTGG GGAGCGGCCG ACTTCCGGGC CGCGATCGCC
GCGAAGATCG GCCGCACCTA TCCCGGCTGG ACCGTCGACC CGGACACCGA GATCTGCGTG
ACCTGCGGCT CCACCGAGGC GATGATCGCC GCGATGCTGG CGCTGGTCGA CCCCGGCGAG
GAGGTCGTGT TCTTCGAGCC GTTCTACGAG AACTACGGCC CCGACTCGAT CCTGTCCGGC
GCGGTCCCCC GCCTGGTGCG CCTGCACGGC CCGGACTGGT CTATCGACCC GGCGGAGCTG
CGCGCGGCCT GCTCGGACCG GACCCGCGCG ATCGTCGTCA ACACCCCGCA CAACCCGACC
GGCAAGGTGT TCAGCGCCGA CGAGCTCGCC CTCATCGCGG AGCTCTGCCA GCGGCACGAC
ATCCTGGTGT TCACCGACGA GATCTACGAA CACATCCACT ATCTGGGGCC GGGCGGGCAC
ATCCCGCCGG CGACCGTCCC GGGCCTGGAG GACCGCACGG TCACCGTGAA CGCGCTGTCG
AAGACGTACG CGGTCACCGG CTGGAGGGTC GGGTGGACCG TCGCCCCCGC TCCCTACACC
GAGGCGATCC GCAAGGTGCA CGACTTCCTC ACCGTCGGCG CCGCCGCGCC GCTGCAGGCC
GCCGGCGTCG CCGCGATGGG ACTGCCGCCC GAGTACTACG CCGGGCTCGC GCAGGAGTAC
CGGGTGCGCC GTGACCTCCT GTGCGGCGCG CTGGAGAACA CCGGGTTCGC CCTCCGTCCA
CCGGACGGCG CCTACTATGT GATGTGCGAC ACCACCGACC TGGACCCGGC CGGCGACGAC
GTCGCCTTCG CGCGGCGGCT GGTGAGCGAG CTCGGGGTCG CGGCCGTCCC GGGATCGTCC
TTCTACGCCG ATCCGGCCGA CGGCCGGCGC ATCGTCCGGT TCGGTTTCCC GAAGCGGCTG
GAGACGCTGC GGGCGGCGAC GGACCGCCTG CGACTGCTCG AGCGCACCCG GGCGGCCCAC
CCGTAA
|
|---|
| Protein sequence | MSVAEETTDQ PPWVGRERDV TAGASGPAMR ISGRAQTFTE SVIRDMTRLA LRHGAVNLAQ
GFPDFACPTE LKEAAKAAID ADVNQYAITW GAADFRAAIA AKIGRTYPGW TVDPDTEICV
TCGSTEAMIA AMLALVDPGE EVVFFEPFYE NYGPDSILSG AVPRLVRLHG PDWSIDPAEL
RAACSDRTRA IVVNTPHNPT GKVFSADELA LIAELCQRHD ILVFTDEIYE HIHYLGPGGH
IPPATVPGLE DRTVTVNALS KTYAVTGWRV GWTVAPAPYT EAIRKVHDFL TVGAAAPLQA
AGVAAMGLPP EYYAGLAQEY RVRRDLLCGA LENTGFALRP PDGAYYVMCD TTDLDPAGDD
VAFARRLVSE LGVAAVPGSS FYADPADGRR IVRFGFPKRL ETLRAATDRL RLLERTRAAH
P
|
|---|
| |