Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0904 |
Symbol | |
ID | 5669318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1056402 |
End bp | 1057232 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239831 |
Product | hypothetical protein |
Protein accession | YP_001505266 |
Protein GI | 158312758 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2887] RecB family exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.107924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGA TGGAGCTGGC CGAGATGCCC CGCCGCTTGT TCTCCTGCAC CCCGTCACGT CTGGCGAGTT TCGAGGACTG CCCGCGCCGG TACCGGATGA CCTACCTTGA CCGGCCGGCG CCGCCGAAGG GGCCGCCGTG GGCGCACACC TCGGTCGGCG TCAGCGTGCA CAACGCGCTG CACCGCTGGT GGGACGTCCC CCTGCCGGCG CGCACCCCCG AGCGGGCCGG GACGCTGCTG CGCACCAGCT GGGTCGAGGA CGGCTTCCGT GACGGTGCGC AGTCCGCAGC CTGGCGGGAG CGGGCCGCGG GGATGGTCGA GGCCTACACC GCCGGTATCG ACCCGGCTGC GGAGCCCCGG GCGGTGGAAC GCCAGGTAGC CACCCGGACA GACATGCTGG CCTTCCATGG CCGGGTCGAC CGCCTGGACG AGCGCGGCGG TGAGCTCGTT GTGGTCGACT ACAAGACCGG GCGGCGGGCG CCGACGGACG ATGACGCGCG CGGGTCCTCG GCCCTGGCCC TCTACGCCCT GGCCGCGGGG CGGATGCTGC GCCGGCCGTG CCGGCGGGTC GAGCTGCACC ATCTCCCGAC CGGAACGGTC GCCGTCGCCG AGCACACCGA GGAGTCGACG GCCCGGCACG TGCGGCGCGC CGAGTCCGTC GCGCGGGACG CGGCCGAGGC GACCGAACGG CTGCGCGCCG GCGCGGACGG GGACACCGCC TTCCCACCCA GCCCCGGGCC GCTGTGCTCC TGGTGTGACT TCCGGCGGCA CTGCCCGCAG GGGCGGGCGG TCTCACCTGA CCGGGAGCCC TGGGCGGCGT TGGCCGAGTA G
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Protein sequence | MDQMELAEMP RRLFSCTPSR LASFEDCPRR YRMTYLDRPA PPKGPPWAHT SVGVSVHNAL HRWWDVPLPA RTPERAGTLL RTSWVEDGFR DGAQSAAWRE RAAGMVEAYT AGIDPAAEPR AVERQVATRT DMLAFHGRVD RLDERGGELV VVDYKTGRRA PTDDDARGSS ALALYALAAG RMLRRPCRRV ELHHLPTGTV AVAEHTEEST ARHVRRAESV ARDAAEATER LRAGADGDTA FPPSPGPLCS WCDFRRHCPQ GRAVSPDREP WAALAE
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