Gene Franean1_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0904 
Symbol 
ID5669318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1056402 
End bp1057232 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content75% 
IMG OID641239831 
Producthypothetical protein 
Protein accessionYP_001505266 
Protein GI158312758 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGA TGGAGCTGGC CGAGATGCCC CGCCGCTTGT TCTCCTGCAC CCCGTCACGT 
CTGGCGAGTT TCGAGGACTG CCCGCGCCGG TACCGGATGA CCTACCTTGA CCGGCCGGCG
CCGCCGAAGG GGCCGCCGTG GGCGCACACC TCGGTCGGCG TCAGCGTGCA CAACGCGCTG
CACCGCTGGT GGGACGTCCC CCTGCCGGCG CGCACCCCCG AGCGGGCCGG GACGCTGCTG
CGCACCAGCT GGGTCGAGGA CGGCTTCCGT GACGGTGCGC AGTCCGCAGC CTGGCGGGAG
CGGGCCGCGG GGATGGTCGA GGCCTACACC GCCGGTATCG ACCCGGCTGC GGAGCCCCGG
GCGGTGGAAC GCCAGGTAGC CACCCGGACA GACATGCTGG CCTTCCATGG CCGGGTCGAC
CGCCTGGACG AGCGCGGCGG TGAGCTCGTT GTGGTCGACT ACAAGACCGG GCGGCGGGCG
CCGACGGACG ATGACGCGCG CGGGTCCTCG GCCCTGGCCC TCTACGCCCT GGCCGCGGGG
CGGATGCTGC GCCGGCCGTG CCGGCGGGTC GAGCTGCACC ATCTCCCGAC CGGAACGGTC
GCCGTCGCCG AGCACACCGA GGAGTCGACG GCCCGGCACG TGCGGCGCGC CGAGTCCGTC
GCGCGGGACG CGGCCGAGGC GACCGAACGG CTGCGCGCCG GCGCGGACGG GGACACCGCC
TTCCCACCCA GCCCCGGGCC GCTGTGCTCC TGGTGTGACT TCCGGCGGCA CTGCCCGCAG
GGGCGGGCGG TCTCACCTGA CCGGGAGCCC TGGGCGGCGT TGGCCGAGTA G
 
Protein sequence
MDQMELAEMP RRLFSCTPSR LASFEDCPRR YRMTYLDRPA PPKGPPWAHT SVGVSVHNAL 
HRWWDVPLPA RTPERAGTLL RTSWVEDGFR DGAQSAAWRE RAAGMVEAYT AGIDPAAEPR
AVERQVATRT DMLAFHGRVD RLDERGGELV VVDYKTGRRA PTDDDARGSS ALALYALAAG
RMLRRPCRRV ELHHLPTGTV AVAEHTEEST ARHVRRAESV ARDAAEATER LRAGADGDTA
FPPSPGPLCS WCDFRRHCPQ GRAVSPDREP WAALAE