| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0884 |
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| Symbol | |
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| ID | 5669298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1029278 |
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| End bp | 1030195 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239811 |
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| Product | RNA polymerase sigma factor SigE |
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| Protein accession | YP_001505246 |
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| Protein GI | 158312738 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.321151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCAG CGGGATTCGC CGCTCCCTGG CCGGCGCGTC GGGTACGTTC GTCGCGAACC
GACCGAGAGG CGGCTGTGGC GGCGCAGGAG CTCGGGGCTG GTTCGGCCGT CCCCGACGCG
GCCGCCACCC CAGAAGTAGC TGGTTGGGTG CCTCCGTCCT GGGAGGACGT GGTCAGGGAG
CACGGCAACC GGGTGTACCG CCTTGCCTAT CGCCTGACGG GCAACGCGCA CGACGCCGAG
GACCTCACCC AGGACGTCTT CGTCCGAGTG TTCCGCTCGC TGGCCGACTA CACCCCCGGC
ACCTTCGAGG GGTGGCTGCA CCGCATCACG ACCAACCTGT TCCTGGACCG GATGCGCCGC
CAGCAGAAGA TCAGGTTTGA CGCCCTGCCG GAGGACACCG AGCGCCTGGC CGGCCGTGAG
GCGAGCCCGG AGGCCGTCTA CGCCGAGAGC CATCTGGACG CCGACGTCGA GGCCGCTCTC
GCCGCGCTGC CGCCGGACTT CCGTGCCGCG GTCGTGCTGT GCGACATCGA GCAGCTCTCC
TACGAGGAGA TCGCACAGAC GCTCGGGGTC AAGCTCGGCA CCGTCCGCAG CCGGATCTCC
CGGGGGCGGG CGATGCTGCG CGCCGCGCTC GCCGACCGCG CCCCGCGCGG GATGGCGATG
GCGGGCGACG ACGGAGTCTC GAGCGCCGCG GTGGGCCCGG CCACGGGGCC GTCCCCGGCC
CAGGCGGAGA CCAGCGGTTC CTGGGAACGG CCGCCGGTGG GTGCCACGAG TCCGGGTGAG
AGCCAGCTCG CGGTCGACGC CGCCGTGGCC GAACCGGACA GGTCGGGGCG CCGTGGTCGC
CGGACCGACC GCCGCCGAGG TCCGGTGAGC AGTGCCGTCG GAGCCGAGGG CGGTGCTCCT
CGGGAGCGGC GGGCGTGA
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| Protein sequence | MSAAGFAAPW PARRVRSSRT DREAAVAAQE LGAGSAVPDA AATPEVAGWV PPSWEDVVRE
HGNRVYRLAY RLTGNAHDAE DLTQDVFVRV FRSLADYTPG TFEGWLHRIT TNLFLDRMRR
QQKIRFDALP EDTERLAGRE ASPEAVYAES HLDADVEAAL AALPPDFRAA VVLCDIEQLS
YEEIAQTLGV KLGTVRSRIS RGRAMLRAAL ADRAPRGMAM AGDDGVSSAA VGPATGPSPA
QAETSGSWER PPVGATSPGE SQLAVDAAVA EPDRSGRRGR RTDRRRGPVS SAVGAEGGAP
RERRA
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