Gene Franean1_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0882 
Symbol 
ID5669296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1026920 
End bp1028197 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content76% 
IMG OID641239809 
Producthypothetical protein 
Protein accessionYP_001505244 
Protein GI158312736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.082163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.219528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGAGTG ACGTGGCGCG GAGTGAGGTG GATCGTCGTC GTTTCGACGA CGACTTCGGC 
TACCGCGGCT CCGCGTACCA CGATGCCAAC TACGACGGTG CCGGGTACGA CGATCCAGAG
TTCCGCGGCC CCGGGTATCC GAGCCATGAG CACCGCGACT CCGGCCGCCA CGATCCCGGC
CGCCACGACC CTGGCTATCG CGACCCTGGC TATCGCGACG CGGGCTACGA CGACCGCGAC
TATCGCGACC CCGGGTACCC CGGCTCCGGC TCCGGCCCGC GCCGTCCCGC CCCTCGCCCC
GACGACACCG GGCACCGGCC CGGCAGCTCG TACCGGGACG ACGCCGGACA CCGGGATGAC
ACCAGGGGCC GGGCCGACAG CGGGTACCGG GGCGATTCCG GTCCCGACGG GCCCGGGCCG
CGGGACGACG GCACCCGGCA GCGCGGCCAG TCCGGTCGGG CCGGTCGCAC CGACCCGACC
GGCCGAAGCG GCTACCCCGA CCGATCCGGC GGACCCGCCC GCCCCGGCTA CCCCGACCGA
TCCGGTGATG CCCTGCGTGC CACCCATCCG GGCCGCGACC GACACCCCGG CGGCCACGGC
GCGCGGCCGG GGTTTCCGGC CGCGGGCGGC TTCGCGCAGC GGCCGCCCGC ACCGCCGCAG
TCACCACCGC CGCCGCGCCG GGAGAACTGG CTCGGCTGGG TGGCGTTCCT GCTCGGAATC
GCGGTGCTCT CCGGCGCGGC CGGCTACACA CTGAACCGGG TGACCAGCGG GTCGGGTACC
TCCGCCGTGG GCCCGACCAC CGGCGAGCAG CCCTCGGGCA CGACCGACCC TGCGGCCGGC
GGCTCGGGGC AGGGCACGGG GCCGACAGCT GAGCAGGTCG CGATCCTGCT CGCCAACCAG
GGCCTGCCGC TGCGGACGAG GGTCGTCTAC ACGGCGCAGA ACGACCCCGA CGGCCTCCTG
GGACGTCCCG GCGGGTACTC CAGCCGGCTC GCCTTCACCG ACGAACGCAT CAGCGCCAGC
GAGATCGCGG GCGCGCCGGC GGACGCCATC GAGCGCGGCG GTGCCATCGA GGTCTTCGTC
GATCCCGCCT CCGCCGCGGG TCGCGGCGCC GCCCTGCGCG CACCCGGCGG CGGTGACCTC
CCCAAGGAGT ACACCTACGT GCGCGGGACG ATCGTGCTGC GGCTCTCACT GATCCTTCCG
GAGGAGATGG CCGCCGGGTA CGAGACCGCC CTCGCCGCGG TTACCGGGCA GCCGTCGCAG
CCCGGGCAGC CGTCCTAG
 
Protein sequence
MRSDVARSEV DRRRFDDDFG YRGSAYHDAN YDGAGYDDPE FRGPGYPSHE HRDSGRHDPG 
RHDPGYRDPG YRDAGYDDRD YRDPGYPGSG SGPRRPAPRP DDTGHRPGSS YRDDAGHRDD
TRGRADSGYR GDSGPDGPGP RDDGTRQRGQ SGRAGRTDPT GRSGYPDRSG GPARPGYPDR
SGDALRATHP GRDRHPGGHG ARPGFPAAGG FAQRPPAPPQ SPPPPRRENW LGWVAFLLGI
AVLSGAAGYT LNRVTSGSGT SAVGPTTGEQ PSGTTDPAAG GSGQGTGPTA EQVAILLANQ
GLPLRTRVVY TAQNDPDGLL GRPGGYSSRL AFTDERISAS EIAGAPADAI ERGGAIEVFV
DPASAAGRGA ALRAPGGGDL PKEYTYVRGT IVLRLSLILP EEMAAGYETA LAAVTGQPSQ
PGQPS