Gene Franean1_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0878 
Symbol 
ID5669292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1023385 
End bp1024005 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content74% 
IMG OID641239805 
Producthypothetical protein 
Protein accessionYP_001505240 
Protein GI158312732 
COG category 
COG ID 
TIGRFAM ID[TIGR03544] DivIVA domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCGC TCGGCCCACC CGGGCATGGC ACGATCGACG GCGTGGTGCT CGCAGTGGAG 
ATCGTGCTTG TCGCGGTGGT CGTCTTCGCC GTCGCCGCGC TGGCCGTCGG CCGGTTCGAC
CGGATGGCGC CGGCCGTGCC CGACGGACCG CACACCGGCC TCGGCGCGCG TTCCGTGGCG
GCCGACGACG TGGCGGACGT CCGGTTCGGC ATGGCGGCCC GCGGCTACCG GATGGCCGAG
GTCGACGCCG TCCTGGCCCG CCTCGCCTAC GAGATCGCCT GGCGTGACGA GGAGCTCGCC
CGCCGGGACG ACGAGCTCGT CCGGCTCGCG GAGTTCGCGC ATCTCGGCGT CGGCGGTGAC
GACGACGACG CGCACCCCGG CCCAGCCTCC GGCCTCGACG CCGACCTTGA CGCCGACGCC
GACATGGCCC GGCCCGGCGA CGTCCAGGCG GAACCCGCCG GGACCGAGGC GGCGCGGGAC
CCTGCCGCGC AGCATGATTC GACCCGGCAT GATCTGGAAA AGCTTGATCC GGAACGGCCT
GCCCCGGAGC GGGCGGATGC CACACGGGGG GACACTCACG GCCCCGAGGC CTCGCCGTCC
GGGGAAAATG GGCGTGGGTA A
 
Protein sequence
MDPLGPPGHG TIDGVVLAVE IVLVAVVVFA VAALAVGRFD RMAPAVPDGP HTGLGARSVA 
ADDVADVRFG MAARGYRMAE VDAVLARLAY EIAWRDEELA RRDDELVRLA EFAHLGVGGD
DDDAHPGPAS GLDADLDADA DMARPGDVQA EPAGTEAARD PAAQHDSTRH DLEKLDPERP
APERADATRG DTHGPEASPS GENGRG