| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0873 |
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| Symbol | dapD |
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| ID | 5669287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1018673 |
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| End bp | 1019554 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239800 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001505235 |
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| Protein GI | 158312727 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0686064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.240801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCG TGAGCGGAGC AAACCCCAGC CCATCGGACG CGGGTGTCAC GTCCGGCGAA
GTCGTGTCTC CCCTGGACCG GGCCATCGAC GACCTGTGGG AGCGTCGCGG CGAGCTGACG
CCGGAGGACA CCCAGGCCCG CAAGGTCATC GTGGGCGCGG TCGACGCGAT CGACGCCGGT
GAGGCCCGGG TCGCCCAGGT CGCCGCGGAC GGCAGCGTCG TCGTCGACGA GCGGGCCAAG
CGGGCGATCC TGCTGTCGTT CAAGGTCCTG CCGATGGTCG AGTCGGCCGC CGGGGACTTC
CACTTCCACG ACCGCGTCCC GCTCAAGACC CGGTTCGACG GCGTGCGGGT GGTGCCGGGC
GCGATCGTCC GCTGGGGCGC CCACGTCGAG CCCGGTGCCG TGCTCATGCC CAGCTACACC
AACATCGGCG GCTACGTCGG TGCCGGGACC CTCGTCGACA CCTGGGCGAC GGTCGGCTCG
TGCGCCCAGG TCGGGCGCAA TGTCCACCTC TCCGGAGGGG TCGGCCTGGG CGGCGTGCTC
GAGCCGCCGA GCGCGGTGCC GGTGGTCGTC GAGGACGACG CGTTCGTCGG CAGCCGCTGC
ATGGTGGTCG AGGGCGCCCG GGTCCGGCGC GGCGCGAAGC TCGGCGCCGG GGCGATCCTG
ACGGCGTCCA CCCACGTCTT CGACGCGGTG ACGGGGGAGG AGTACCCGCG CGGGGAGATC
CCGGAGCGCG CGGTGGCCGT CGGCTCCAGC CGGGTCCGCT CCTTCCCGGC CGGCGAGTTC
GCCATGCCCT GCATCCTCGT CCTGCGCACT CTGGACGAGG GCGAGATCCA CGACAAGCTC
GCGCTGAACG ACATCCTGCG TGAGCACGGC GTGGCCTCCT GA
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| Protein sequence | MSSVSGANPS PSDAGVTSGE VVSPLDRAID DLWERRGELT PEDTQARKVI VGAVDAIDAG
EARVAQVAAD GSVVVDERAK RAILLSFKVL PMVESAAGDF HFHDRVPLKT RFDGVRVVPG
AIVRWGAHVE PGAVLMPSYT NIGGYVGAGT LVDTWATVGS CAQVGRNVHL SGGVGLGGVL
EPPSAVPVVV EDDAFVGSRC MVVEGARVRR GAKLGAGAIL TASTHVFDAV TGEEYPRGEI
PERAVAVGSS RVRSFPAGEF AMPCILVLRT LDEGEIHDKL ALNDILREHG VAS
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