Gene Franean1_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0870 
Symbol 
ID5669284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1015821 
End bp1016297 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content70% 
IMG OID641239797 
Producthypothetical protein 
Protein accessionYP_001505232 
Protein GI158312724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0379969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.356444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTATG TCGTCCACAT CACTCCGGCC GACATCGGCT CCCGGGTCGT GATCCGGCGC 
CGTATCTCTG GTCCGCTCCC CCTGAGCGAT GTTCTGGGCA CGCTTGAGTC CTGGTCGGAA
GGCGAACTCC GCCTCCGCCG CACCGACGGT ACGACAGTGA GTGTGCCCGA GGAATCCCTC
GTAGCGGCGC GTGTCGTGCC CTTGACACCC CGGCGGGCCA ATCCTCGGCC CCCCGGTCGG
GCGACACCAT TGGACCAGCC CGGAACGCCC CCTCGCCACG ACATTGCGGA ACGCAACGAT
CAGATCACGG AATCAGATCG CCCCGCCGGT CTCCGCACGG ACGGCCAGGT CGGCGCCGAC
GCGGATGGAG AGTACCCGGA CGCCGGTGAC GACGATACCG GGGACAATGG CGGCGACCGG
GACGCGAGTG GCGCCGACCC GGGCGGCGCC GGCCCGAGTG TGGAGGTCCA GCGGTGA
 
Protein sequence
MVYVVHITPA DIGSRVVIRR RISGPLPLSD VLGTLESWSE GELRLRRTDG TTVSVPEESL 
VAARVVPLTP RRANPRPPGR ATPLDQPGTP PRHDIAERND QITESDRPAG LRTDGQVGAD
ADGEYPDAGD DDTGDNGGDR DASGADPGGA GPSVEVQR