| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0865 |
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| Symbol | |
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| ID | 5669279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1011150 |
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| End bp | 1012067 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239792 |
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| Product | LmbE family protein |
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| Protein accession | YP_001505227 |
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| Protein GI | 158312719 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | [TIGR03445] 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.76321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGCAAT CCGCCGAAAC GGTGCTGCCG CCGCGCCGCG TGCTTTTCGT GCATGCCCAC
CCGGATGACG AGGTCATCTC GACCGGCGTG ACCATGGCCT CCTACGCGGC TCGGCCCGAC
ACGCACGTGA CTCTCGTCAC CTGCACGCTG GGTGAGGTCG GTGAGGTTCT GGTTCCCGAG
CTGATCAACC TCAGGTCGGA TCTCGGTGAC CAGCTTGGCG GGTACCGGAT CGGTGAGCTC
GACCGGTCCT GCGCCGAGCT CGGCGTCACC GACCACCGTT TCCTCGGCGG CGCCGGCCGG
TGGCGGGACA GCGGCATGAT CGACACACCG GCCAACGACG ATCCGCGCTG CCTGTGGCGC
GCGGACCTCG ACGAGGCGTC GGCGGCCCTG GTCCAGGTGG TGCGGGAGGT CCGTCCACAG
GTTCTCGTCA CCTACGACGA GAACGGCGCC TACGGCCATC CGGATCACAT CCGGGCACAT
GACGTGTCCG TCCGGGCCTT CGCCGATGCC GCGAACCCCG ACTTCGCGCC GGAAGCCGGT
CAGCCGTGGC AGATCTCCAA GTTCTACGAG ACGGCCACGC CCAAGTCGTT CGTCCAGGCT
GGTATCGAGT ATTTCCGGGA GTCCGGGGGC GAGAGCCCGT TCGGCCCCGC CGAGTCCGCG
GACGACATTC CGCTGGCGGT TCCCGACGAG CTGATCACCA CCGAGATCCA GGCCGACGAG
TACCTGCCCG CGAAGGTGGC GGCGATGCGG GCGCACCGCA CCCAGATGGC GGTGGACGGC
TTCTTCTTCG CGCTCGCCGA CGGCATCGGC AAGCGGGCCT GGGCCGCCGA GCACTTCGTG
CTGACCCGGG GTGAGCGCGG CCCGGGAACG GAACCCGGCG CCCACGAAAC CGACCTCTTC
GCCGGCCTCC CCCTCTAG
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| Protein sequence | MTQSAETVLP PRRVLFVHAH PDDEVISTGV TMASYAARPD THVTLVTCTL GEVGEVLVPE
LINLRSDLGD QLGGYRIGEL DRSCAELGVT DHRFLGGAGR WRDSGMIDTP ANDDPRCLWR
ADLDEASAAL VQVVREVRPQ VLVTYDENGA YGHPDHIRAH DVSVRAFADA ANPDFAPEAG
QPWQISKFYE TATPKSFVQA GIEYFRESGG ESPFGPAESA DDIPLAVPDE LITTEIQADE
YLPAKVAAMR AHRTQMAVDG FFFALADGIG KRAWAAEHFV LTRGERGPGT EPGAHETDLF
AGLPL
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