| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0864 |
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| Symbol | |
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| ID | 5669278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1009173 |
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| End bp | 1011014 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239791 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001505226 |
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| Protein GI | 158312718 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.662767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGTAC GCGCCGATCT TCGTAATGTC GCGATCATTG CCCATGTCGA CCACGGCAAA
ACGACTCTTG TTGACGCGAT GCTCCGGCAG TCCGGCGCGT TCGGTGAGCG TGGTGAGGCC
ACCGACCGGG TGATGGACTC GATGGACCTC GAACGCGAGA AGGGGATCAC CATTCTCGCG
AAGAACACCG CCGTACGTTT CGGTGACGTC ACCATTAACA TCATCGATAC TCCCGGCCAC
GCCGATTTCG GCGGCGAGGT GGAACGCGGT CTCGCGATGG TCGACGGCGT CCTGCTGCTG
GTGGACGCCA GCGAGGGCCC GCTGCCGCAG ACCCGGTTCG TGCTGCGCAA GGCGCTCGCT
GCCCGGCTGC CCGTCGTGCT CGTCATCAAC AAGGTCGACC GGTCCGACGC CCGCATCAGC
GAGGTCGTCG ACGAGGCCTA CGAGCTCTTC CTCGACCTCG ACGCGGACGA GGACCAGATC
GACTTCCCGA TCGTCTACTG CAACGCCAAG GCGGGCCGGG CGTCCACGAC CCGCCCGGAG
AACGGCACGA GCCCTGACTC GCCGGACCTC AAGCCGCTGT TCGACCTGCT GCTGGAGGCG
ATCCCGGCGC CGTCCCACAC CGAGGGCGCG CCGCTGCAGG CGCTGGTGAC GAACCTGGAC
GCCTCGCCCT ACCTCGGCCG GCTCGCGCTG TGCCGGGTGC ACAACGGGAC GATCACCCGG
GGGCAGACCG TCGTGCTGTG CCGGGTGGAC GGCAGCCAGC AGCGGGTGAA GATCACCGAG
ATGCTGATGA CCGAGGCCCT GGAGCGGGTT CCCGCTGAGC AGGCCGGCCC CGGCGACATC
ATCGCCGTCG CCGGTATCCC CGACATCATG ATCGGCGAGA CCCTGGCCGA CGCCGAGGAC
CCGCACGCAC TCCCGGTGAT CACGGTGGAC GAGCCGTCGA TCAGCATGAC GATCGGCGTG
AACACCTCGC CGCTGGCCGG CAGGTCCGGC AAGAAGCTGA CCGCGCGCCT GCTGAAGAAC
CGGCTGGACG TCGAGCTCGT CGGCAACGTC TCCATCCGGG TGCTGCCGAC CGAGCGGCCG
GACACCTGGG AGGTCCAGGG CCGTGGTGAG CTGGCGCTGG CCATCCTGGT CGAGCTGATG
CGCCGCGAGG AGTTCGAGCT GACGGTCGGC AAGCCCCAGG TGGTGACCAG GGAGATCGAC
GGGAAGGTGC ACGAGCCCGT CGAGCGGCTG ACCATCGACG CCCCGGAGGA GTACCTCGGG
GTGCTCACCC AGCTGCTGGC GCTGCGCAAG GGCCGCCTGG AGCAGATGGT GAACCACGGG
ACCGGCTGGA TCCGGCTGGA GTACCTCGTC CCGGCCCGCG GGCTGATCGG GTTCCGGACG
GAGTTCCTCA CCGAGACCCG TGGCACCGGG CTGCTGCACC ACGTCTTCGA CCGCTACGAG
CCCTGGTTCG GCGAGCTGCG CACCCGTGCG ACCGGCTCGA TGGTCGCGGA CCGGTCGGGC
GTCGCGACCG CCTACGCCCT GTTCAACCTG CAGGACCGCG GGACGATGTT CGTCGCGCCG
ACCACCGAGC TCTACGAGGG CATGATCGTC GGTGAGAACT CCCGGGCGGA CGACATGGAC
GTCAACCCGA CCAAGGAGAA GAAGCTCACC AACATGCGGT CCTCGACCGG CGACGAGCTG
GTGCGGCTCA CCCCGCACCG TCAGCTCTCG CTGGAGCAGG CGCTGGAGTT CTGCCGTGAG
GACGAGTGCG TCGAGGTGAC CCCGGCGACG GTGCGCCTGC GCAAGGTGGC GCTCGCCGCG
TCGGAGCGGG AGAAGCTGCG CTCGCGTCGC CGCACCGGCT GA
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| Protein sequence | MPVRADLRNV AIIAHVDHGK TTLVDAMLRQ SGAFGERGEA TDRVMDSMDL EREKGITILA
KNTAVRFGDV TINIIDTPGH ADFGGEVERG LAMVDGVLLL VDASEGPLPQ TRFVLRKALA
ARLPVVLVIN KVDRSDARIS EVVDEAYELF LDLDADEDQI DFPIVYCNAK AGRASTTRPE
NGTSPDSPDL KPLFDLLLEA IPAPSHTEGA PLQALVTNLD ASPYLGRLAL CRVHNGTITR
GQTVVLCRVD GSQQRVKITE MLMTEALERV PAEQAGPGDI IAVAGIPDIM IGETLADAED
PHALPVITVD EPSISMTIGV NTSPLAGRSG KKLTARLLKN RLDVELVGNV SIRVLPTERP
DTWEVQGRGE LALAILVELM RREEFELTVG KPQVVTREID GKVHEPVERL TIDAPEEYLG
VLTQLLALRK GRLEQMVNHG TGWIRLEYLV PARGLIGFRT EFLTETRGTG LLHHVFDRYE
PWFGELRTRA TGSMVADRSG VATAYALFNL QDRGTMFVAP TTELYEGMIV GENSRADDMD
VNPTKEKKLT NMRSSTGDEL VRLTPHRQLS LEQALEFCRE DECVEVTPAT VRLRKVALAA
SEREKLRSRR RTG
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