| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0853 |
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| Symbol | |
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| ID | 5669269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1000496 |
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| End bp | 1001452 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239782 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001505217 |
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| Protein GI | 158312709 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000296204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.358313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTCCC CGAAATCCGC CACCACCGCG ACGTGCAAGG AAAACAACGA AGGAGCCGGA
GCCACGGCTC GTTCGGCGGC GGCCGGCCGG GCACGCGGTC GCAACGGCGC GGCCAACCGG
CCGCGGCCGG TCCCGATCCT GCGCTACGAC GTTGCCGCCG ATCCCACGGG CCACGCGCCA
CGGAGATCGA CGGTGACGCC CGCCGTCTTC GCGCGCCACC GTCGCATGAT CCAGAGATCC
CGTCGCCACT TCATGACCGT CGTGGACTAC TGCGCGGCGC TGCGCTCGGC CGACGTGGCG
CCCGACGCGA TCGTCATCAC CTTCGACGGC GATCACGCGG AGACCTTCGT CGCGGCCCGT
GAGCTGGCCG AACGAGGCCT CGCCGCCACC GTCTTCGTCA CCACCTCCCG GCTCGGGACA
CCCGGCATGC TCAGCGAGGG GGACGTGCGC CGCCTGCACG AGATGGGCGT CGAGATCGGC
GCGGCCGGGC ACAGCGGGCG CCGGCTCGAC GGTCTGCAGC GCTCCGACGT CACCGCGGAG
ATCACGCTGA GCCGGCGGCG GCTGGCCGCG ATCACCGGCG ACGAGCCACG CTCGTTCGCC
TACCCCCGCG GAGGCTGGGA CCCGACCGCG CGCCAGCTGG TGATCGCGGC CGGATGCGGC
GGCGCGTGCG CCGTCGGGCA GGCGCTGTCC CACCAGGGTG ACGACCCGTT CGCCATTACC
AGGCTGACCG TGGACGGCGG TCTCGCCGAC CACCGCGTGC GCGCCTGGCT GGACGGGATC
GGCCGGACGC TGCCGCGCAC GGTCCCGGCC AGGCCGCGGA TCAGGGTCGT CCCGTCGGTG
CTGGGGGCAC GGGCGCCGGC ACGGCTGGCC GGCGCGTACC GCCCCCGGTT CGCGCCGCAC
ATCGCCGAGG GGACCCGTCT CCCCGCGCCC GGCCAACCCA CCCTCCCACC GCTGTGA
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| Protein sequence | MSSPKSATTA TCKENNEGAG ATARSAAAGR ARGRNGAANR PRPVPILRYD VAADPTGHAP
RRSTVTPAVF ARHRRMIQRS RRHFMTVVDY CAALRSADVA PDAIVITFDG DHAETFVAAR
ELAERGLAAT VFVTTSRLGT PGMLSEGDVR RLHEMGVEIG AAGHSGRRLD GLQRSDVTAE
ITLSRRRLAA ITGDEPRSFA YPRGGWDPTA RQLVIAAGCG GACAVGQALS HQGDDPFAIT
RLTVDGGLAD HRVRAWLDGI GRTLPRTVPA RPRIRVVPSV LGARAPARLA GAYRPRFAPH
IAEGTRLPAP GQPTLPPL
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