Gene Franean1_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0847 
Symbol 
ID5669263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp993816 
End bp994148 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content73% 
IMG OID641239776 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_001505211 
Protein GI158312703 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.550336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TTGACCGTCA GCGGAGCCCC ACCACTGGAC CCGGTTCGGG CGGTGTTCCG 
GAGACCACGC CAGGGACTAC CGCGGGTACT GCGCCGGGAC CGACCTCCGG GGCCGCCGCG
GGTGTCACCC CGGGGACCGC TTCCGGTCTC ACCTTCGAGG CGGCTCGCGC GGAGCTGGAG
GATGTCGTCC GCAGGCTGGA GGCCGGGGGA TGCGCTCTCG AGGAGTCCCT CGCGCTCTGG
GAACGCGGCG AGGAACTTGC CGCCCTCTGC CAGCGCTTCC TCGACGGCGC CCGGGCCCGC
CTCACCCCCG CCACGACCTC CGAACCTTCC TGA
 
Protein sequence
MTDLDRQRSP TTGPGSGGVP ETTPGTTAGT APGPTSGAAA GVTPGTASGL TFEAARAELE 
DVVRRLEAGG CALEESLALW ERGEELAALC QRFLDGARAR LTPATTSEPS