| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0845 |
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| Symbol | ispH |
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| ID | 5669261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 991412 |
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| End bp | 992428 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641239774 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001505209 |
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| Protein GI | 158312701 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.63897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGCT CGCCGCTCTT CCAGCCTCGC CGCTCCCGCG TAGACTGCTG CGACATGGGG
CGGGTCTTGT TGGCCAAGCC GCGCGGCTAC TGCGCGGGTG TCGATCGCGC GGTCCAAACC
GTCGAGAAGG CACTCGATCT GTACGGGTCG CCGGTGTATG TACGCAAGCA GATCGTGCAC
AACGCTCACG TCGTCAAGAC GCTGGAAGCG AAGGGCGCGA TCTTTGTCGA AGAGACCGAC
GAGGTGCCTC ACGGCGCCAC GGTGGTGTTC TCGGCGCACG GCGTGGCACC GACGGTCCAC
GAGGAGGCTT CCTCGCGTCA GCTTCGCACC ATTGACGCGA CGTGCCCCCT CGTTACCAAG
GTCCACTCCG AGGCTCGCCG GTTCGCCAAG GAGGATCTGG ACATCCTCCT CATCGGTCAT
GAGGGCCACG AGGAGGTAGT AGGCACCACC GGCCAGGCGC CGGACCGTAT CCATCTGGTC
GACGGTCCTG AGGACGCCGC CGCTGTGAAG GTCCGGGACC CGAAGCGGGT CGCGTTCCTC
TCGCAGACGA CGCTCTCGGT CGACGAGACG CAGACAACGG TCAAGGCGCT TCGCGAGCGG
TTCCCGCATC TACAGGGGCC GCCGAGCGAC GACATCTGCT ACGCCACCCA GAACCGCCAG
GTGGCCGTCA AGGAGATCGC CGAGAAGGTC GACCTGCTCA TCGTGGTCGG CTCGCCGAAC
TCCTCCAACT CGGTCCGGCT CGTCGAGGTC GCCCTCGACG CCGGTGCACC CAAGTCGTTC
CTCGTGGACG ACTGCTCCGA GGTGGATGAG GGCTGGCTCG ACGGTGTCGA GACGGTTGGT
GTGACGAGCG GGGCGTCCGT CCCCGAGGAA CTCGTCACCG GGGTCATGGC GTGGCTGGCG
GACCGCGGGT TCAACGACGT CGAGGAAGTC ACCTCGGCGG ACGAGCACCT GCTGTTCGCG
CTCCCGCCGG AACTGCGTCG CGACATGCGT GCCCGGGAGC GGGCCGCGGG CGCCTGA
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| Protein sequence | MLRSPLFQPR RSRVDCCDMG RVLLAKPRGY CAGVDRAVQT VEKALDLYGS PVYVRKQIVH
NAHVVKTLEA KGAIFVEETD EVPHGATVVF SAHGVAPTVH EEASSRQLRT IDATCPLVTK
VHSEARRFAK EDLDILLIGH EGHEEVVGTT GQAPDRIHLV DGPEDAAAVK VRDPKRVAFL
SQTTLSVDET QTTVKALRER FPHLQGPPSD DICYATQNRQ VAVKEIAEKV DLLIVVGSPN
SSNSVRLVEV ALDAGAPKSF LVDDCSEVDE GWLDGVETVG VTSGASVPEE LVTGVMAWLA
DRGFNDVEEV TSADEHLLFA LPPELRRDMR ARERAAGA
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