| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0806 |
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| Symbol | |
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| ID | 5669222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 943502 |
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| End bp | 945457 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239734 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001505170 |
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| Protein GI | 158312662 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0494755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0402011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGGAA CGCCCAGACA GGTGGTCGCC GACGTCCAGC GGATCGCGCG GCGGCGCAAC
GCCCCGATCG TGCTCGAGCT CGACCTGACG TCCGATCCGG TCGAGGGCGT GCCCACGGAC
CCGCTGACGG CGGCGGTCTC GCACCGGCGG ACCGGCCTGC GGGAGATCGT CGACGGGCTG
CGCCGAGCGG CTCGGGACGA GCGCGCGAGC GTCGTCGTGG CGCACGTCGC CGCCTGCGGG
ATGCCGCTGG CGCGGGTGCA GGAGATCCGG GACGCCGTCG CCGAGTTCCG GGCCTCCGGC
GGGGCCGCCT ACGCCTACGC GGACACCTTC GGCGAGTTCG GCGGCGGCAC CGTCGCCTAC
TACCTGGCCT GCGCGTTCGA CGAGATCTGG CTCGCGCCGC CCGGTGACCT GGGCCTGACC
GGCGTCGCGA TGGAGACCCC GTTCGTGCGC GACGCGCTCG ACCGGCTCGG TGTCACCGTT
GAGATCGGCC AGCGCCACGA GTACAAGAAC GCGGTGAACA CGCTGGTGGA GCGGGACTTC
ACCCCCGCCC ACCGGGAGGC GCTGGCCCGC ATCGTCGACT CCAGCGCCGA GCAGATCGTC
GCCGGGATCG CGCAGAGCCG GGGCCTGTCG GCCGACCAGG TCCGGCGCAT GATCGACATC
GCGCCGCTGG CCGGCCACGT GGCGCTCTCC GCCGGCCTCG TCGACCGCAT CGGCTACCGC
GACGAGATCT ATGAGTACGC CCGGGAGCGA GCCCGCGCGC TGGCCGGCCG GGACCCGGGC
GATGACGCCG GGGAGACGGT CGAACCGGTT CTGAGGTACG TCTCCGCCTA CCGGCGGGCG
GCCGTCCGCA AGGCCGAGTC GCCGGTGCGC CGCGCCGGGT CGTTCGCCTC GTCGCTGCCG
GCGACGATCT TCCTGCGCGA GTCCGGCCGT TCCCGCACGG GAACGGCCGG TGGTCCCGGG
GACGAGAGAC CGGCCGGCGC GGCGGGCCCG TCGCGGGCGG GCGCGGACGT GGTGCCGCCG
GAGATCGATC CGCACACGTC GGTGGTGGCG CTCGTGCACG GCACCGGGCC GGTGGTCCTC
GGCGGAGCCA CGATGCCCTT CTCGGGGCCG GTGTTGGCCG CCGACGCCGT CACGGCAGCG
TTCCGCGCCG CCGCACGTGA TCCTTCTGTG GCCGCCGCGG TCTTTCGGGT GGAGAGCCCT
GGAGGCTCCT ATGTGGCCTC GGACGTGGTC CGTCGGGAGA TCGAACGGTT CCGATCCACA
GGCCGTCCAG TAGTGGTCTC GATGGGCTCG GTGGCCGCGT CGGGCGGGTA CTTCGTCGCG
CTCGCGGGGG ACGTGATCGT CGCGAACCCG GGAACGCTGA CCGGGTCCAT CGGTGTCTTC
GGTGGCAAGC AGGTCGTGCG CGACCTGTTC GACAAGGTCG GCATCGGCTT CGGCGCCGTC
GCCGCCGGCG AGAACGCGCT GATGATGTCC CCGCGCCAGC CGTTCACCCA GGCCGGGCGG
GCGAAGCTGG ACGAGTTCCT CGACCGCGTC TACGCCGACT TCGTGGACAA GGTCGCCCAG
GCCCGCCGCA TGTCGCACGG CGACGCCCAC GAGCTCGCCC GCGGCCGGGT CTGGACGGGC
GCCGACGCCC ACCGTCACGG TCTGGTGGAC GAGCTGGGCG GGCTGGCCCA CGCGATCGAC
CTCGCCTGGG CCCGGGCCGG CCTGCCGGCA GGGGAGACGC CCAGGGTGCG GCTCACGCCG
AAGTCGTCGG TGTTCGACCG GCTGCGCGCG CCGAAGTCCA GCGAGGAGCC GGCCGCGGCG
TCCGCGCTGG CACCCGGGCT GGGCGCCGGG CTCGCCGGCC TCGGGCTGCG CGGCGCGCTG
CTCGTCGGCG AGCGGCTCCT GGGGGCTGGC CTGGCCCGGG CGGGCCTGCC GGGTGCCGGC
CCCCTGGTGA TGCCGCCGGT CGGCGAGATC CGTTAG
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| Protein sequence | MVGTPRQVVA DVQRIARRRN APIVLELDLT SDPVEGVPTD PLTAAVSHRR TGLREIVDGL
RRAARDERAS VVVAHVAACG MPLARVQEIR DAVAEFRASG GAAYAYADTF GEFGGGTVAY
YLACAFDEIW LAPPGDLGLT GVAMETPFVR DALDRLGVTV EIGQRHEYKN AVNTLVERDF
TPAHREALAR IVDSSAEQIV AGIAQSRGLS ADQVRRMIDI APLAGHVALS AGLVDRIGYR
DEIYEYARER ARALAGRDPG DDAGETVEPV LRYVSAYRRA AVRKAESPVR RAGSFASSLP
ATIFLRESGR SRTGTAGGPG DERPAGAAGP SRAGADVVPP EIDPHTSVVA LVHGTGPVVL
GGATMPFSGP VLAADAVTAA FRAAARDPSV AAAVFRVESP GGSYVASDVV RREIERFRST
GRPVVVSMGS VAASGGYFVA LAGDVIVANP GTLTGSIGVF GGKQVVRDLF DKVGIGFGAV
AAGENALMMS PRQPFTQAGR AKLDEFLDRV YADFVDKVAQ ARRMSHGDAH ELARGRVWTG
ADAHRHGLVD ELGGLAHAID LAWARAGLPA GETPRVRLTP KSSVFDRLRA PKSSEEPAAA
SALAPGLGAG LAGLGLRGAL LVGERLLGAG LARAGLPGAG PLVMPPVGEI R
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