Gene Franean1_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0802 
Symbol 
ID5669218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp936950 
End bp937447 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID641239730 
ProductMerR family transcriptional regulator 
Protein accessionYP_001505166 
Protein GI158312658 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0285806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGC CGTGTCACGG ATCGACGTAC AGTCGTCAGA CGCCCGGTTT GCCACCGGCG 
ACAGATGCTG ACGTAAGGGT CGACTTGTCC ACCACGCGAC GCCGTGACGT CCACCAGATC
GGTGATGTCG CCGAGCGAGT CGGGCTGTCC CTGCGCACGG TTCGGTACTA CGAGGAAGCC
GGGCTCCTGA TGCCGGTCGG TCGGACGGTG GGCGGCTTCC GCCTCTACGA CGACGACGCG
GTCGACCGGC TCTTCCTGAT CAAGAAAATG AAGCCGCTCG GCTTCACCCT GGAGGAGATG
CGTTCCCTGC TCGTGCTGCG CGACGAGCTC GAGGAGGCGG ACCTGCCCGC CGAACGGCGC
GCCGAGCTCC AGGCCCGGCT GGCCACCTGG GTCGCCCTCG CCGAGGAGAA GCTGATCACA
CTGCGCGAGC AGGTGCAGGT GGCCGAGGCG TTCGTCGGCG GACTCCACGA CGACGCCGGC
CGCTCCGGCG CCACCTGA
 
Protein sequence
MRAPCHGSTY SRQTPGLPPA TDADVRVDLS TTRRRDVHQI GDVAERVGLS LRTVRYYEEA 
GLLMPVGRTV GGFRLYDDDA VDRLFLIKKM KPLGFTLEEM RSLLVLRDEL EEADLPAERR
AELQARLATW VALAEEKLIT LREQVQVAEA FVGGLHDDAG RSGAT